RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 PEX11BO96011 259 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 KDELR1P24390 212 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 SRSF1Q07955 248 aaKnown RBP eCLIP18.36■□□□□ 0.53
VPS72-207ENST00000640458 NSUN2Q08J23 767 aaKnown RBP eCLIP18.36■□□□□ 0.53
VPS72-207ENST00000640458 STAT4Q14765 748 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 GRM3Q14832 879 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 PAFAH1B3Q15102 231 aaKnown RBP18.36■□□□□ 0.53
VPS72-207ENST00000640458 ZNF284Q2VY69 593 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 SETMARQ53H47 684 aaPredicted RBP18.36■□□□□ 0.53
VPS72-207ENST00000640458 TMCO4Q5TGY1 634 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 LRRC38Q5VT99 294 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 CDCP2Q5VXM1 449 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 NCBP2-AS2Q69YL0 99 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 LRRC49Q8IUZ0 686 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 TSEN2Q8NCE0 465 aaKnown RBP18.36■□□□□ 0.53
VPS72-207ENST00000640458 HCAR2Q8TDS4 363 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 CINPQ9BW66 212 aaPredicted RBP18.36■□□□□ 0.53
VPS72-207ENST00000640458 ASCL3Q9NQ33 180 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 KLHL11Q9NVR0 708 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 DKK3Q9UBP4 350 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 SEPT3Q9UH03 358 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 IL17BQ9UHF5 180 aa18.36■□□□□ 0.53
VPS72-207ENST00000640458 ZFR2Q9UPR6 939 aaKnown RBP18.36■□□□□ 0.53
VPS72-207ENST00000640458 HEMK1Q9Y5R4 338 aaPredicted RBP18.36■□□□□ 0.53
VPS72-207ENST00000640458 A0A0A6YYK5 440 aaPredicted RBP18.35■□□□□ 0.53
VPS72-207ENST00000640458 FFAR2O15552 330 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 PCDH8O95206 1070 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 NDUFA10O95299 355 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 DEKP35659 375 aaKnown RBP18.35■□□□□ 0.53
VPS72-207ENST00000640458 ABL2P42684 1182 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 NOP2P46087 812 aaKnown RBP18.35■□□□□ 0.53
VPS72-207ENST00000640458 RGRP47804 291 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 SLC10A7Q0GE19 358 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 LBRQ14739 615 aaKnown RBP18.35■□□□□ 0.53
VPS72-207ENST00000640458 TMEM259Q4ZIN3 620 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 KIAA1161Q6NSJ0 714 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 SRLQ86TD4 932 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 IQCHQ86VS3 1027 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 ZSCAN30Q86W11 494 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 TMEM139Q8IV31 216 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 RAPGEF5Q92565 580 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 FEM1CQ96JP0 617 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 PSKH2Q96QS6 385 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 TUBGCP5Q96RT8 1024 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 FAM117AQ9C073 453 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 CA5BQ9Y2D0 317 aa18.35■□□□□ 0.53
VPS72-207ENST00000640458 ZNF487B1APH4 448 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 PRAMEF26H0Y7S4 382 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 TSPAN6O43657 245 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 MYF5P13349 255 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 DGKAP23743 735 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 RENBPP51606 427 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 RPS21P63220 83 aaKnown RBP18.34■□□□□ 0.53
VPS72-207ENST00000640458 CCZ1BP86790 482 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 CCZ1P86791 482 aaPredicted RBP18.34■□□□□ 0.53
VPS72-207ENST00000640458 OVGP1Q12889 678 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 NFATC3Q12968 1075 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 ZFYVE27Q5T4F4 411 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 SEL1L3Q68CR1 1132 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 VSIG1Q86XK7 387 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 RHOT1Q8IXI2 618 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 ATPAF2Q8N5M1 289 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 PQLC3Q8N755 202 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 OR4C6Q8NH72 309 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 ZNF641Q96N77 438 aaPredicted RBP18.34■□□□□ 0.53
VPS72-207ENST00000640458 ZNF830Q96NB3 372 aaPredicted RBP18.34■□□□□ 0.53
VPS72-207ENST00000640458 RNF157Q96PX1 679 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 ABCG4Q9H172 646 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 SUV39H2Q9H5I1 410 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 UCKL1Q9NWZ5 548 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 TFR2Q9UP52 801 aa18.34■□□□□ 0.53
VPS72-207ENST00000640458 TSPAN11A1L157 253 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 K7ENP7 123 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 AREL1O15033 823 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 MUSKO15146 869 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 SPINT1O43278 529 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 MFSD11O43934 449 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 BUB1BO60566 1050 aaPredicted RBP18.33■□□□□ 0.52
VPS72-207ENST00000640458 PIGNO95427 931 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 TIMP2P16035 220 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 COMTP21964 271 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 RBMS1P29558 406 aaKnown RBP18.33■□□□□ 0.52
VPS72-207ENST00000640458 HSPA9P38646 679 aaKnown RBP18.33■□□□□ 0.52
VPS72-207ENST00000640458 SUOXP51687 545 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 GALNT2Q10471 571 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 INO80CQ6PI98 192 aaPredicted RBP18.33■□□□□ 0.52
VPS72-207ENST00000640458 RAD9BQ6WBX8 426 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 TTC7BQ86TV6 843 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 NSMCE1Q8WV22 266 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 KLK6Q92876 244 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 KLHDC7BQ96G42 594 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 ALG6Q9Y672 507 aa18.33■□□□□ 0.52
VPS72-207ENST00000640458 LRRD1A4D1F6 860 aa18.32■□□□□ 0.52
VPS72-207ENST00000640458 C3orf70A6NLC5 250 aaPredicted RBP18.32■□□□□ 0.52
VPS72-207ENST00000640458 SLC31A1O15431 190 aa18.32■□□□□ 0.52
VPS72-207ENST00000640458 CCDC175P0C221 793 aa18.32■□□□□ 0.52
VPS72-207ENST00000640458 CKMT1AP12532 417 aa18.32■□□□□ 0.52
VPS72-207ENST00000640458 PRLRP16471 622 aa18.32■□□□□ 0.52
VPS72-207ENST00000640458 GARSP41250 739 aaKnown RBP18.32■□□□□ 0.52
VPS72-207ENST00000640458 ZNF235Q14590 738 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms