RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 ENO4A6NNW6 628 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 SLCO1B7G3V0H7 640 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 TADA2AO75478 443 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 IPO13O94829 963 aaKnown RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 ATXN8OSP0DMR3 200 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 TCN1P20061 433 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 YWHAQP27348 245 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 PBX3P40426 434 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 KCNQ1P51787 676 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 CLCN5P51795 746 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 HK2P52789 917 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 GALNT3Q14435 633 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 POLD3Q15054 466 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 SLC14A2Q15849 920 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 FAM83EQ2M2I3 478 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 C10orf120Q5SQS8 335 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 FAM171A1Q5VUB5 890 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 FBXL19Q6PCT2 694 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 C16orf89Q6UX73 402 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 SLC24A5Q71RS6 500 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 CUZD1Q86UP6 607 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 PCDH20Q8N6Y1 951 aaKnown RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 OR13C4Q8NGS5 318 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 TMA16Q96EY4 203 aaKnown RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 DNAJC1Q96KC8 554 aaKnown RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 KLHL32Q96NJ5 620 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 NR1H4Q96RI1 486 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 SEMA3CQ99985 751 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 MFSD1Q9H3U5 465 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 GSTO2Q9H4Y5 243 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 RNF186Q9NXI6 227 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 MARCH2Q9P0N8 246 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 PRPF19Q9UMS4 504 aaKnown RBP9.4□□□□□ -0.91
NECAP1-225ENST00000640209 PCDHB5Q9Y5E4 795 aa9.4□□□□□ -0.91
NECAP1-225ENST00000640209 A0A0D9SEW6 157 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 CAPN8A6NHC0 703 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 DRGXA6NNA5 263 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 TMEM189-UBE2V1I3L0A0 370 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FBP2O00757 339 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 CASQ2O14958 399 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 CA12O43570 354 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FAM189BP81408 668 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 SERINC3Q13530 473 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 HERC3Q15034 1050 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 TRIP4Q15650 581 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 GSTA3Q16772 222 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 AGAP9Q5VTM2 703 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 ISLR2Q6UXK2 745 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 ISCA2Q86U28 154 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PGAM4Q8N0Y7 254 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 LILRA2Q8N149 483 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 EXT2Q93063 718 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PPP2R3CQ969Q6 453 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FUBP3Q96I24 572 aaKnown RBP eCLIP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 RPRD1AQ96P16 312 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PPP1R2P1Q96PQ5 205 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 VCXQ9H320 206 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FBXO44Q9H4M3 255 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 POLR3BQ9NW08 1133 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PCDHGB4Q9UN71 923 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PCDHGB5Q9Y5G0 923 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PTGDR2Q9Y5Y4 395 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FAM92AA1XBS5 289 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 CCDC162PA2VCL2 907 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 NT5C1B-RDH14C9J2C7 533 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 SLC22A2O15244 555 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 SLC7A4O43246 635 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 RAMP2O60895 175 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PAPSS2O95340 614 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 EOMESO95936 686 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 GOT2P00505 430 aaKnown RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 IGLV3-27P01718 113 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 SLC2A3P11169 496 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PAX3P23760 479 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 ACLYP53396 1101 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 CDH13P55290 713 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FLOT2Q14254 428 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 NFE2Q16621 373 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 UNC50Q53HI1 259 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 OGFRL1Q5TC84 451 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 RNF19BQ6ZMZ0 732 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 CHSY3Q70JA7 882 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 PQLC1Q8N2U9 271 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 ATP6V0D2Q8N8Y2 350 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 BHLHE22Q8NFJ8 381 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 OR9I1Q8NGQ6 314 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 BLOC1S5Q8TDH9 187 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 GIPC2Q8TF65 315 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 STON2Q8WXE9 905 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FATE1Q969F0 183 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 BTN2A3PQ96KV6 586 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 C3orf30Q96M34 536 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 SEPT5Q99719 369 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 MEAF6Q9HAF1 191 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FBRSL1Q9HCM7 1045 aaKnown RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 GMPR2Q9P2T1 348 aaKnown RBP9.39□□□□□ -0.91
NECAP1-225ENST00000640209 GIMAP2Q9UG22 337 aa9.39□□□□□ -0.91
NECAP1-225ENST00000640209 GREB1Q4ZG55 1949 aa9.38□□□□□ -0.91
NECAP1-225ENST00000640209 ATP6AP2A0A1C7CYW4 349 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms