RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ZFYVE26Q68DK2 2539 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 H3BM21 787 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 HTRA2O43464 458 aaPredicted RBP17.81■□□□□ 0.44
PNKP-230ENST00000638016 RECQL5O94762 991 aaPredicted RBP17.81■□□□□ 0.44
PNKP-230ENST00000638016 JUPP14923 745 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 SERPINB6P35237 376 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 MMP13P45452 471 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 RENBPP51606 427 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 SUOXP51687 545 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 GALNT2Q10471 571 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 SLC10A2Q12908 348 aaPredicted RBP17.81■□□□□ 0.44
PNKP-230ENST00000638016 TBX2Q13207 712 aaPredicted RBP17.81■□□□□ 0.44
PNKP-230ENST00000638016 ALG11Q2TAA5 492 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 ANKRD20A8PQ5CZ79 823 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 PRRT3Q5FWE3 981 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 MACC1Q6ZN28 852 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 DPPA4Q7L190 304 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 KCTD6Q8NC69 237 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 ZNHIT6Q9NWK9 470 aaKnown RBP17.81■□□□□ 0.44
PNKP-230ENST00000638016 CHD6Q8TD26 2715 aa17.81■□□□□ 0.44
PNKP-230ENST00000638016 COL27A1Q8IZC6 1860 aaPredicted RBP17.8■□□□□ 0.44
PNKP-230ENST00000638016 C1SP09871 688 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 ELFN1P0C7U0 828 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 CKMT1AP12532 417 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 LHCGRP22888 699 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 GARSP41250 739 aaKnown RBP17.8■□□□□ 0.44
PNKP-230ENST00000638016 PAFAH1B3Q15102 231 aaKnown RBP17.8■□□□□ 0.44
PNKP-230ENST00000638016 CNGA3Q16281 694 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 CDKN3Q16667 212 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 HS1BP3Q53T59 392 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 FAXCQ5TGI0 409 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 MARC1Q5VT66 337 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 DENND2CQ68D51 928 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 GUSBP11Q6P575 273 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 CRTC1Q6UUV9 634 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 ENPP7Q6UWV6 458 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 RD3Q7Z3Z2 195 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 FAF2Q96CS3 445 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 PDXPQ96GD0 296 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 ZNF670Q9BS34 389 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 APOOQ9BUR5 198 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 TFR2Q9UP52 801 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 RAXQ9Y2V3 346 aa17.8■□□□□ 0.44
PNKP-230ENST00000638016 URB1O60287 2271 aaKnown RBP17.8■□□□□ 0.44
PNKP-230ENST00000638016 NEMP2A6NFY4 417 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 NPIPB15A6NHN6 443 aaPredicted RBP17.79■□□□□ 0.44
PNKP-230ENST00000638016 CPP00450 1065 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 PDHA1P08559 390 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 ALPPL2P10696 532 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 TSHRP16473 764 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 CTPS1P17812 591 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 YPEL5P62699 121 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 DSC2Q02487 901 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 PPARDQ03181 441 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 PTK2BQ14289 1009 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 NFATC4Q14934 902 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 ZFYVE27Q5T4F4 411 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 TSPAN33Q86UF1 283 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 HID1Q8IV36 788 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 TEX26Q8N6G2 289 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 CCDC42Q96M95 316 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 SEMA3CQ99985 751 aa17.79■□□□□ 0.44
PNKP-230ENST00000638016 MRPL40Q9NQ50 206 aaKnown RBP17.79■□□□□ 0.44
PNKP-230ENST00000638016 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.78■□□□□ 0.44
PNKP-230ENST00000638016 CPED1A4D0V7 1026 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 LRRD1A4D1F6 860 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 AKR1B15C9JRZ8 316 aaPredicted RBP17.78■□□□□ 0.44
PNKP-230ENST00000638016 SOCS5O75159 536 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 TPM1P09493 284 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 ALPIP09923 528 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 KDELR1P24390 212 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 MAN1A1P33908 653 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 HSPA9P38646 679 aaKnown RBP17.78■□□□□ 0.44
PNKP-230ENST00000638016 ITKQ08881 620 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 ILKQ13418 452 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 MTM1Q13496 603 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 ACOX1Q15067 660 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 AGERQ15109 404 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 PDK2Q15119 407 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 RFLNAQ6ZTI6 216 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 HSD11B1LQ7Z5J1 315 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 SLC35F3Q8IY50 421 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 FAM181AQ8N9Y4 354 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 IFI44Q8TCB0 444 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 NSMCE1Q8WV22 266 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 LGR4Q9BXB1 951 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 GOLPH3Q9H4A6 298 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 FGF22Q9HCT0 170 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 SPASTQ9UBP0 616 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 TTLL3Q9Y4R7 772 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 PCDHB1Q9Y5F3 818 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 CSNK1G3Q9Y6M4 447 aa17.78■□□□□ 0.44
PNKP-230ENST00000638016 DSPP15924 2871 aaKnown RBP17.77■□□□□ 0.44
PNKP-230ENST00000638016 TMEM202A6NGA9 273 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 C3orf70A6NLC5 250 aaPredicted RBP17.77■□□□□ 0.44
PNKP-230ENST00000638016 PGLSO95336 258 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 HLA-DQB2P05538 268 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 KRT7P08729 469 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 TNNT1P13805 278 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 VIPR1P32241 457 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms