RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 KRT13P13646 458 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TUBP50607 506 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 C21orf59P57076 290 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 SLC8A3P57103 927 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 HNRNPDQ14103 355 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 UAP1Q16222 522 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 PRSS53Q2L4Q9 553 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 POM121L1PQ3SYA9 428 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 RFWD3Q6PCD5 774 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 KDM7AQ6ZMT4 941 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CHST9Q7L1S5 443 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 SCD5Q86SK9 330 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TMA16Q96EY4 203 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 AGPAT1Q99943 283 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TXLNGYQ9BZA5 131 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CARD9Q9H257 536 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 LHX5Q9H2C1 402 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 LRRC4Q9HBW1 653 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 NOCTQ9UK39 431 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 AMFRQ9UKV5 643 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 SCML2Q9UQR0 700 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ANKRD6Q9Y2G4 727 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 LCE2BO14633 110 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 GJB3O75712 270 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 SEMA4FO95754 770 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 MOCS2O96007 188 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 KRT14P02533 472 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 C4BPAP04003 597 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CISD3P0C7P0 127 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ZDHHC11BP0C7U3 371 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 IGFALSP35858 605 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 EIF2S3P41091 472 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ASPAP45381 313 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ABCG1P45844 678 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 HARS2P49590 506 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 MECP2P51608 486 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TKTL1P51854 596 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 RNASE9P60153 205 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CFAP58Q5T655 872 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TADA2BQ86TJ2 420 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 PIGZQ86VD9 579 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 SLC20A1Q8WUM9 679 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 IFT81Q8WYA0 676 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CTNNBL1Q8WYA6 563 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 BIRC7Q96CA5 298 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 MYOCQ99972 504 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 AP1M1Q9BXS5 423 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CAPS2Q9BXY5 557 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ULBP1Q9BZM6 244 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ZDHHC5Q9C0B5 715 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 DDX47Q9H0S4 455 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 THAP2Q9H0W7 228 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 GP6Q9HCN6 339 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TM9SF3Q9HD45 589 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ITM2CQ9NQX7 267 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 THAP10Q9P2Z0 257 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 FTSJ1Q9UET6 329 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CGGBP1Q9UFW8 167 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 RRP15Q9Y3B9 282 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CEP192Q8TEP8 1941 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 SHROOM3Q8TF72 1996 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 A6NNZ2 444 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 PYCARD-AS1I3L0S3 204 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 KRIT1O00522 736 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 FLRT2O43155 660 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 BRINP1O60477 761 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 RNASEH2AO75792 299 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ASS1P00966 412 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 NID1P14543 1247 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 CHRNB2P17787 502 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 MAT2AP31153 395 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 HSD17B3P37058 310 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 GRK6P43250 576 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 RGS7P49802 495 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 BNC1Q01954 994 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ID3Q02535 119 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ENPEPQ07075 957 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TESK1Q15569 626 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TUBB8Q3ZCM7 444 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ZACNQ401N2 412 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TTC31Q49AM3 519 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 FYB2Q5VWT5 728 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TMEM215Q68D42 235 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 MMS22LQ6ZRQ5 1243 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 RHOT2Q8IXI1 618 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 FAM71AQ8IYT1 594 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 UBA3Q8TBC4 463 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 SHC3Q92529 594 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ALG3Q92685 438 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 PTPRN2Q92932 1015 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 DHRS1Q96LJ7 313 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 KREMEN1Q96MU8 473 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 RUFY1Q96T51 708 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 MCMBPQ9BTE3 642 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 ACE2Q9BYF1 805 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 APOBEC3GQ9HC16 384 aaKnown RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 TMBIM4Q9HC24 238 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 COQ4Q9Y3A0 265 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms