RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 AP4E1Q9UPM8 1137 aa9.38□□□□□ -0.91
TARDBP-227ENST00000622057 ATP8A1Q9Y2Q0 1164 aa9.38□□□□□ -0.91
TARDBP-227ENST00000622057 TSPAN11A1L157 253 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 TMEM202A6NGA9 273 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 LRRC10BA6NIK2 292 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 TMX2-CTNND1H3BSU7 103 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 CACNB4O00305 520 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 PLD2O14939 933 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 TEX33O43247 280 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 RECQL5O94762 991 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 ITGA2BP08514 1039 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 ATXN8OSP0DMR3 200 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 KRT10P13645 584 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 ERCC2P18074 760 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 HTR7P34969 479 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 UGT1A5P35504 534 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 POLR2LP62875 67 aaKnown RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 MYL5Q02045 173 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 CLN3Q13286 438 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 MAMLD1Q13495 774 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 MTM1Q13496 603 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 AGERQ15109 404 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 KCTD16Q68DU8 428 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 LIPIQ6XZB0 460 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 ARHGAP36Q6ZRI8 547 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 IRF2BP2Q7Z5L9 587 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 CLEC14AQ86T13 490 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 SFTPA2Q8IWL1 248 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 OR6C4Q8NGE1 309 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 OR56A4Q8NGH8 313 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 OR1E3Q8WZA6 343 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 TTC9Q92623 222 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 FUBP1Q96AE4 644 aaKnown RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 PDXPQ96GD0 296 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 LIN37Q96GY3 246 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 TMEM74Q96NL1 305 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 ERGIC2Q96RQ1 377 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 TUBGCP5Q96RT8 1024 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 KCTD15Q96SI1 283 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 RBM15Q96T37 977 aaKnown RBP eCLIP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 SNRNP25Q9BV90 132 aaKnown RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 STRADBQ9C0K7 418 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 DPEP2Q9H4A9 486 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 ATP13A3Q9H7F0 1226 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 SUDS3Q9H7L9 328 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 PARVAQ9NVD7 372 aa9.37□□□□□ -0.91
TARDBP-227ENST00000622057 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-227ENST00000622057 CFAP69A5D8W1 941 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 J3QKU1 62 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 EFSO43281 561 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 ATMINO43313 823 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 RNF8O76064 485 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 ELFN1P0C7U0 828 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 JMJD7P0C870 316 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 GLB1P16278 677 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 KELP23276 732 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 SLC5A2P31639 672 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 MMP12P39900 470 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 MLLT3P42568 568 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 CSNK1DP48730 415 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 IL10RBQ08334 325 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 NSUN2Q08J23 767 aaKnown RBP eCLIP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 RALGDSQ12967 914 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 EIF3IQ13347 325 aaKnown RBP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 ARHGEF7Q14155 803 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 ACOX1Q15067 660 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 TGIF1Q15583 401 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 PPP6R3Q5H9R7 873 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 AFMIDQ63HM1 303 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 DENND2CQ68D51 928 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 OGFOD3Q6PK18 319 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 RFX8Q6ZV50 586 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 ARFGAP1Q8N6T3 406 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 GPR156Q8NFN8 814 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 CCL4L1Q8NHW4 92 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 PDCD6IPQ8WUM4 868 aaKnown RBP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 SNRNP27Q8WVK2 155 aaKnown RBP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 CCNL2Q96S94 520 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-227ENST00000622057 PEBP4Q96S96 227 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 LGR4Q9BXB1 951 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 TMEM168Q9H0V1 697 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 CYP4F12Q9HCS2 524 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 LRIT1Q9P2V4 623 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 PISDQ9UG56 409 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 SSUH2Q9Y2M2 353 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 LOXL2Q9Y4K0 774 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 DGKBQ9Y6T7 804 aa9.36□□□□□ -0.91
TARDBP-227ENST00000622057 TMEM191CA6NGB0 347 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 B4DGG1 531 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 B8ZZF3 427 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 D6RAR5 112 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 PYCARD-AS1I3L0S3 204 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 PRPSAP2O60256 369 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 ITIH1P19827 911 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 MIPP30301 263 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 RENBPP51606 427 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 MAPK10P53779 464 aa9.35□□□□□ -0.91
TARDBP-227ENST00000622057 KIAA1024LP59773 190 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms