RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ENTPD4Q9Y227 616 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 LRRC72A6NJI9 287 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PABPC1P11940 636 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZNF23P17027 643 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ATP5F1P24539 256 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 DRG2P55039 364 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 RAB10P61026 200 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ILF2Q12905 390 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 ILF3Q12906 894 aaKnown RBP eCLIP9.28□□□□□ -0.92
GGA3-223ENST00000621870 NAB1Q13506 487 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PDGFRLQ15198 375 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ATAD3BQ5T9A4 648 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 FBXL22Q6P050 247 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 BNC2Q6ZN30 1099 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 PHYKPLQ8IUZ5 450 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 BBS7Q8IWZ6 715 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PARP9Q8IXQ6 854 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZNF567Q8N184 647 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZIC5Q96T25 663 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 SH3GL1Q99961 368 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 GPR62Q9BZJ7 368 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 FAM124BQ9H5Z6 455 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 ACSS3Q9H6R3 686 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 KLC4Q9NSK0 619 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CITO14578 2027 aa9.27□□□□□ -0.92
GGA3-223ENST00000621870 MTMR11A4FU01 709 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 MYBL2P10244 700 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PKMP14618 531 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PRKG2Q13237 762 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SEMA5AQ13591 1074 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 CHMP1BQ7LBR1 199 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 TAF8Q7Z7C8 310 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 BEND7Q8N7W2 519 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 ASZ1Q8WWH4 475 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PLD4Q96BZ4 506 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 REPS1Q96D71 796 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PGM2Q96G03 612 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 MS4A4AQ96JQ5 239 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SLC39A8Q9C0K1 460 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SLC25A51Q9H1U9 297 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 EXOSC4Q9NPD3 245 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 KLHL28Q9NXS3 571 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 DTLQ9NZJ0 730 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 ANKRD6Q9Y2G4 727 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 KRT87PA6NCN2 255 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SOCS7O14512 581 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 MATN3O15232 486 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 INSIG1O15503 277 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 RGS14O43566 566 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 USP1O94782 785 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 BMP10O95393 424 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PRAMEF1O95521 474 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 VIPP01282 170 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 C2P06681 752 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 UNGP13051 313 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 CCNCP24863 283 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 CHRNA4P43681 627 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 CXCR3P49682 368 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 FASTKQ14296 549 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 XKR6Q5GH73 641 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 CYP20A1Q6UW02 462 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 CAMK1DQ8IU85 385 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 HID1Q8IV36 788 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 TNIP2Q8NFZ5 429 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 BPIFB1Q8TDL5 484 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 AENQ8WTP8 325 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 NKD2Q969F2 451 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 TIFAQ96CG3 184 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 IL12RB2Q99665 862 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 TMEM175Q9BSA9 504 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SMG9Q9H0W8 520 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 EVA1BQ9NVM1 165 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 NDUFAF1Q9Y375 327 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 INSL5Q9Y5Q6 135 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SNX13Q9Y5W8 968 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 A0A087X1B8 175 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 FCHO1O14526 889 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 INPPL1O15357 1258 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 WDR47O94967 919 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SOD2P04179 222 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 HNRNPLP14866 589 aaKnown RBP eCLIP9.27□□□□□ -0.932e-7■■■■□ 23.5
GGA3-223ENST00000621870 CXCR2P25025 360 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PSMA4P25789 261 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 SERPINB3P29508 390 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 AP1S1P61966 158 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 PLOD1Q02809 727 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 MAD2L1Q13257 205 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 SF1Q15637 639 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 FBXW10Q5XX13 1052 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 GPR135Q8IZ08 494 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 DEFB107AQ8IZN7 70 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 CENPLQ8N0S6 344 aaPredicted RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 TMEM40Q8WWA1 233 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 GFM2Q969S9 779 aaKnown RBP9.27□□□□□ -0.93
GGA3-223ENST00000621870 FAXDC2Q96IV6 333 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 SEPHS2Q99611 448 aa9.27□□□□□ -0.93
GGA3-223ENST00000621870 ALOX15BO15296 676 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms