RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 FKBPLQ9UIM3 349 aa15.8■□□□□ 0.12
CPSF1-213ENST00000620219 CCL26Q9Y258 94 aa15.8■□□□□ 0.12
CPSF1-213ENST00000620219 HCFC2Q9Y5Z7 792 aa15.8■□□□□ 0.12
CPSF1-213ENST00000620219 TDRD15B5MCY1 1934 aaKnown RBP15.8■□□□□ 0.12
CPSF1-213ENST00000620219 VPS26AO75436 327 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 GOT2P00505 430 aaKnown RBP15.79■□□□□ 0.12
CPSF1-213ENST00000620219 TYRP14679 529 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 ITIH4Q14624 930 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 DET1Q7L5Y6 550 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 C10orf107Q8IVU9 208 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 DDIASQ8IXT1 998 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 FITM2Q8N6M3 262 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 MYLK2Q9H1R3 596 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 PLLPQ9Y342 182 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 ACTN3Q08043 901 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-213ENST00000620219 FAM109BQ6ICB4 259 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-213ENST00000620219 Q6ZVU0 165 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 TTLL2Q9BWV7 592 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 XPR1Q9UBH6 696 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 IL1BP01584 269 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 LIMK2P53671 638 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 TAS2R39P59534 338 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 PDE1CQ14123 709 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-213ENST00000620219 KLF16Q9BXK1 252 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-213ENST00000620219 SLCO3A1Q9UIG8 710 aa15.79■□□□□ 0.12
CPSF1-213ENST00000620219 CFLARO15519 480 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 AHSGP02765 367 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 MPOP05164 745 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 PDHA1P08559 390 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 SLC1A6P48664 564 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 TEDDM1Q5T9Z0 273 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 SPPL3Q8TCT6 385 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 IMP4Q96G21 291 aaKnown RBP15.78■□□□□ 0.12
CPSF1-213ENST00000620219 WWP1Q9H0M0 922 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 TBC1D14Q9P2M4 693 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 CD84Q9UIB8 345 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 CCDC162PA2VCL2 907 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 H0Y3Z8 333 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 TK2O00142 265 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 KDELR3O43731 214 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 LZTS3O60299 673 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-213ENST00000620219 IGLV3-25P01717 112 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 PRKCHP24723 683 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 PBLDP30039 288 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-213ENST00000620219 RAB10P61026 200 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 LMAN2Q12907 356 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 NXNL1Q96CM4 212 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 ACE2Q9BYF1 805 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-213ENST00000620219 RNF112Q9ULX5 631 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 GUCA1CO95843 209 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 CD70P32970 193 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 PFKPQ01813 784 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 NAB1Q13506 487 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 MARK2Q7KZI7 788 aaKnown RBP15.78■□□□□ 0.12
CPSF1-213ENST00000620219 DEC1Q9P2X7 70 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 VNN2O95498 520 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 RGRP47804 291 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 SESN3P58005 492 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 NUDT18Q6ZVK8 323 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 SLC40A1Q9NP59 571 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 VWA7Q9Y334 891 aa15.78■□□□□ 0.12
CPSF1-213ENST00000620219 TRIM13O60858 407 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 PABPC1P11940 636 aaKnown RBP15.77■□□□□ 0.12
CPSF1-213ENST00000620219 SHHQ15465 462 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 MMEL1Q495T6 779 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 PIGWQ7Z7B1 504 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 UCMAQ8WVF2 138 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 NOL6Q9H6R4 1146 aaKnown RBP15.77■□□□□ 0.12
CPSF1-213ENST00000620219 ZFYVE1Q9HBF4 777 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 TAS2R13Q9NYV9 303 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 ZNF180Q9UJW8 692 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 F11P03951 625 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 TFEBP19484 476 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 CASP2P42575 452 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 PTPRRQ15256 657 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 RBBP7Q16576 425 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 GBP7Q8N8V2 638 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-213ENST00000620219 BRSK1Q8TDC3 778 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 PRICKLE1Q96MT3 831 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-213ENST00000620219 SPATA16Q9BXB7 569 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 PHACTR1Q9C0D0 580 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 TXLNGQ9NUQ3 528 aa15.77■□□□□ 0.12
CPSF1-213ENST00000620219 RFPL1O75677 317 aa15.77■□□□□ 0.11
CPSF1-213ENST00000620219 ALADP13716 330 aa15.77■□□□□ 0.11
CPSF1-213ENST00000620219 OCRLQ01968 901 aa15.77■□□□□ 0.11
CPSF1-213ENST00000620219 MAP7D1Q3KQU3 841 aa15.77■□□□□ 0.11
CPSF1-213ENST00000620219 PLEKHG6Q3KR16 790 aa15.77■□□□□ 0.11
CPSF1-213ENST00000620219 KYAT3Q6YP21 454 aaKnown RBP15.77■□□□□ 0.11
CPSF1-213ENST00000620219 PGBD3Q8N328 593 aa15.77■□□□□ 0.11
CPSF1-213ENST00000620219 MNX1P50219 401 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 KCNJ2P63252 427 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 ZNF33AQ06730 810 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 RBM20Q5T481 1227 aaKnown RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 BTN3A1O00481 513 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 TRIM24O15164 1050 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 SMAD6O43541 496 aaKnown RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 RPP40O75818 363 aaKnown RBP15.76■□□□□ 0.11
CPSF1-213ENST00000620219 CRABP2P29373 138 aa15.76■□□□□ 0.11
CPSF1-213ENST00000620219 BOP1Q14137 746 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms