RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PIH1D2Q8WWB5 315 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 MTBPQ96DY7 904 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 CDX2Q99626 313 aaPredicted RBP18.08■□□□□ 0.48
VRK3-225ENST00000601912 MAGEE1Q9HCI5 957 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 IARS2Q9NSE4 1012 aaKnown RBP18.08■□□□□ 0.48
VRK3-225ENST00000601912 SPO11Q9Y5K1 396 aa18.08■□□□□ 0.48
VRK3-225ENST00000601912 UGT1A9O60656 530 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 FAM155BO75949 473 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 SNRPAP09012 282 aaKnown RBP18.07■□□□□ 0.48
VRK3-225ENST00000601912 GP5P40197 560 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 ABL2P42684 1182 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 PPP2R2AP63151 447 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 E2F5Q15329 346 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 SMAD1Q15797 465 aaKnown RBP18.07■□□□□ 0.48
VRK3-225ENST00000601912 AAK1Q2M2I8 961 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 GRTP1Q5TC63 336 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 OR13J1Q8NGT2 312 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 CALML6Q8TD86 181 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 LRIG1Q96JA1 1093 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 FAM167BQ9BTA0 163 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 UGT1A7Q9HAW7 530 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 UGT1A10Q9HAW8 530 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 UGT1A8Q9HAW9 530 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 PHTF1Q9UMS5 762 aa18.07■□□□□ 0.48
VRK3-225ENST00000601912 C2CD4DB7Z1M9 353 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 SLC7A4O43246 635 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 MT-ND3P03897 115 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 LPOP22079 712 aaPredicted RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 POLR2LP62875 67 aaKnown RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 CBX1P83916 185 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 GPR153Q6NV75 609 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 PACS1Q6VY07 963 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 GDPD4Q6W3E5 623 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 KDM7AQ6ZMT4 941 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 SUGP1Q8IWZ8 645 aaKnown RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 CHST14Q8NCH0 376 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 MDGA1Q8NFP4 955 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 PPM1EQ8WY54 764 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 PTPRN2Q92932 1015 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 HLA-CQ95604 372 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 ECHDC3Q96DC8 303 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 SMC6Q96SB8 1091 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 AGAP2Q99490 1192 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 OSBPL1AQ9BXW6 950 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 IL36AQ9UHA7 158 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 KCTD3Q9Y597 815 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 MYLKQ15746 1914 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 A0A0J9YYE9 177 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 GOLGA8TH3BQL2 631 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 RPP40O75818 363 aaKnown RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 TRBC1P01850 177 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 UGT2B4P06133 528 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 FOSL2P15408 326 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 ARNTP27540 789 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 ACVR1Q04771 509 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 UGP2Q16851 508 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 EMC10Q5UCC4 262 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 NAIF1Q69YI7 327 aaPredicted RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 NEPROQ6NW34 567 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 STRA8Q7Z7C7 330 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 CNTN4Q8IWV2 1026 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 LMNTD2Q8IXW0 634 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 OR6P1Q8NGX9 317 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 GRIN3AQ8TCU5 1115 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 SPOCK2Q92563 424 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 HDAC10Q969S8 669 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 DNAJC1Q96KC8 554 aaKnown RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 PHF7Q9BWX1 381 aaPredicted RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 CNOT10Q9H9A5 744 aaKnown RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 NLE1Q9NVX2 485 aaPredicted RBP18.06■□□□□ 0.48
VRK3-225ENST00000601912 SLC17A6Q9P2U8 582 aa18.06■□□□□ 0.48
VRK3-225ENST00000601912 KIAA1549LQ6ZVL6 1849 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 EDDM13A0A1B0GTR0 161 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 TRIM49D1C9J1S8 452 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 BUD23O43709 281 aaKnown RBP18.05■□□□□ 0.48
VRK3-225ENST00000601912 BRAFP15056 766 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 CTPS1P17812 591 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 SPRP35270 261 aaPredicted RBP18.05■□□□□ 0.48
VRK3-225ENST00000601912 ZNF140P52738 457 aaPredicted RBP18.05■□□□□ 0.48
VRK3-225ENST00000601912 GYS2P54840 703 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 CSE1LP55060 971 aaKnown RBP18.05■□□□□ 0.48
VRK3-225ENST00000601912 ZNF234Q14588 700 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 HNRNPA1L2Q32P51 320 aaKnown RBP18.05■□□□□ 0.48
VRK3-225ENST00000601912 BRAT1Q6PJG6 821 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 SERPINA13PQ6UXR4 307 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 MZB1Q8WU39 189 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 CHFRQ96EP1 664 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 SELENOSQ9BQE4 189 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 GPR63Q9BZJ6 419 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 MFSD1Q9H3U5 465 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 LIMD1Q9UGP4 676 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 ZNF711Q9Y462 761 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 PSAT1Q9Y617 370 aa18.05■□□□□ 0.48
VRK3-225ENST00000601912 FOXO6A8MYZ6 492 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 AURKAO14965 403 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 STX7O15400 261 aaKnown RBP18.04■□□□□ 0.48
VRK3-225ENST00000601912 SIN3BO75182 1162 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 LEFTY1O75610 366 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 SLC4A1P02730 911 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 NFKBIAP25963 317 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms