RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	WDCP	Q9H6R7	721 aa		13.86	□□□□□ -0.19
SHKBP1-208	ENST00000595726	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.86	□□□□□ -0.19
SHKBP1-208	ENST00000595726	OCIAD1	Q9NX40	245 aa		13.86	□□□□□ -0.19
SHKBP1-208	ENST00000595726	SLC39A1	Q9NY26	324 aa		13.86	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ILVBL	A1L0T0	632 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	TMEM202	A6NGA9	273 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	TMEM110-MUSTN1	A8MSY1	372 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	THAP12	O43422	761 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	NUDT21	O43809	227 aa	Known RBP	13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	TIMP2	P16035	220 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	HTR1B	P28222	390 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	CD1C	P29017	333 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	DCT	P40126	519 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	GNA12	Q03113	381 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	STX1A	Q16623	288 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	EFHC1	Q5JVL4	640 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	NKAIN2	Q5VXU1	208 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ANKS6	Q68DC2	871 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	SASS6	Q6UVJ0	657 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	LRRC31	Q6UY01	552 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	GDPD4	Q6W3E5	623 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	DRC7	Q8IY82	874 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	SRRM1	Q8IYB3	904 aa	Known RBP	13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	PLA2G15	Q8NCC3	412 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ARHGEF26	Q96DR7	871 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ANO10	Q9NW15	660 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ARHGEF38	Q9NXL2	777 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	TMEM63C	Q9P1W3	806 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ZNF212	Q9UDV6	495 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	DNAJC12	Q9UKB3	198 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	PILRA	Q9UKJ1	303 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ADGRG4	Q8IZF6	3080 aa		13.85	□□□□□ -0.19
SHKBP1-208	ENST00000595726	EFCAB7	A8K855	629 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	PES1	O00541	588 aa	Known RBP	13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	HGS	O14964	777 aa	Predicted RBP	13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	MED7	O43513	233 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	HSF2BP	O75031	334 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	PCCB	P05166	539 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	GLI1	P08151	1106 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	PNMA6A	P0CW24	399 aa	Predicted RBP	13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	USP8	P40818	1118 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	CXCR3	P49682	368 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	SMYD5	Q6GMV2	418 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	FAM183BP	Q6ZVS7	135 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	TIPARP	Q7Z3E1	657 aa	Known RBP	13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	HEATR4	Q86WZ0	1026 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	PLPP6	Q8IY26	295 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	NRSN1	Q8IZ57	195 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	OR2AP1	Q8NGE2	309 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	ISG20	Q96AZ6	181 aa	Known RBP	13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	WDR92	Q96MX6	357 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	PHF12	Q96QT6	1004 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	CTRC	Q99895	268 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	FGF22	Q9HCT0	170 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	TAB2	Q9NYJ8	693 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	TMEM9	Q9P0T7	183 aa		13.84	□□□□□ -0.19
SHKBP1-208	ENST00000595726	MED13	Q9UHV7	2174 aa		13.83	□□□□□ -0.19
SHKBP1-208	ENST00000595726	NF1	P21359	2839 aa		13.83	□□□□□ -0.19
SHKBP1-208	ENST00000595726	IGLV3-10	A0A075B6K4	115 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	CAPN5	O15484	640 aa	Predicted RBP	13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	POP4	O95707	220 aa	Known RBP	13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	TNFRSF8	P28908	595 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	LIMK2	P53671	638 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	RNASE9	P60153	205 aa	Known RBP	13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	MYL5	Q02045	173 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	MTA1	Q13330	715 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	SEPT6	Q14141	434 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	KRT31	Q15323	416 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	OLFML1	Q6UWY5	402 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	ASB18	Q6ZVZ8	466 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	FAM129C	Q86XR2	697 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	PASD1	Q8IV76	773 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	GALNT11	Q8NCW6	608 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	AGBL5	Q8NDL9	886 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	RNF31	Q96EP0	1072 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	DDA1	Q9BW61	102 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	SPRY4	Q9C004	299 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	PRDM8	Q9NQV8	689 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	NDFIP2	Q9NV92	336 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	FANCL	Q9NW38	375 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	ASNSD1	Q9NWL6	643 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	FHOD1	Q9Y613	1164 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	MRPS18B	Q9Y676	258 aa	Known RBP	13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	DGKB	Q9Y6T7	804 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	APC	P25054	2843 aa		13.83	□□□□□ -0.2
SHKBP1-208	ENST00000595726	LRP4	O75096	1905 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	CHD5	Q8TDI0	1954 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	TTLL8	A6PVC2	850 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	RHPN2P1	A8MT19	583 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	FOXN3	O00409	490 aa	Predicted RBP	13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	CLDN1	O95832	211 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	ERBB2	P04626	1255 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	CSTF2	P33240	577 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	CLCN1	P35523	988 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	TYRO3	Q06418	890 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	POLD3	Q15054	466 aa	Predicted RBP	13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	TMEM52B	Q4KMG9	183 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	BRMS1L	Q5PSV4	323 aa		13.82	□□□□□ -0.2
SHKBP1-208	ENST00000595726	DCAF12	Q5T6F0	453 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms