RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MARCH4Q9P2E8 410 aaPredicted RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 LRFN2Q9ULH4 789 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 KCTD3Q9Y597 815 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 COPG1Q9Y678 874 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 GREB1Q4ZG55 1949 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 OR51F1A6NGY5 319 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 ENPP3O14638 875 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 BUD23O43709 281 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 VNN2O95498 520 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 GLP2RO95838 553 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 KCNA5P22460 613 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 RSPO2Q6UXX9 243 aaPredicted RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 BBS5Q8N3I7 341 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 HIPK4Q8NE63 616 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 BLOC1S5Q8TDH9 187 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 ANKRD49Q8WVL7 239 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 RCN3Q96D15 328 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 MYEOVQ96EZ4 313 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 HHIPL1Q96JK4 782 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 CDK5RAP1Q96SZ6 601 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 VCXQ9H320 206 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 MRGBPQ9NV56 204 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 STK39Q9UEW8 545 aa16.64■□□□□ 0.25
PRKCSH-217ENST00000592741 SLC38A8A6NNN8 435 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 TBC1D4O60343 1298 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 WISP3O95389 354 aaPredicted RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 EPOP01588 193 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 CD1EP15812 388 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 HOXB8P17481 243 aaPredicted RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 CDKN2DP55273 166 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 DUSP4Q13115 394 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 BTG3Q14201 252 aaPredicted RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 GSTA3Q16772 222 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 TMEM154Q6P9G4 183 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 CUZD1Q86UP6 607 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 PGAM4Q8N0Y7 254 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 UCMAQ8WVF2 138 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 TBATAQ96M53 351 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 PDFQ9HBH1 243 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 VPS28Q9UK41 221 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 FIS1Q9Y3D6 152 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 ARVCFO00192 962 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 MUSKO15146 869 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 SKAP2O75563 359 aaPredicted RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 GJB3O75712 270 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 RPP40O75818 363 aaKnown RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 GOT2P00505 430 aaKnown RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 SERPINF2P08697 491 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 GALNT1Q10472 559 aaPredicted RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 CDC16Q13042 620 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 ART3Q13508 389 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 RTP2Q5QGT7 225 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 GPR158Q5T848 1215 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 MRNIPQ6NTE8 343 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 ANKS3Q6ZW76 656 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 PNPLA1Q8N8W4 532 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 GPR150Q8NGU9 434 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 RAET1EQ8TD07 263 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 DNAJC1Q96KC8 554 aaKnown RBP16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 ALG9Q9H6U8 611 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 EFCAB1Q9HAE3 211 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 ARL5AQ9Y689 179 aa16.63■□□□□ 0.25
PRKCSH-217ENST00000592741 CD3EAPO15446 510 aaKnown RBP16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 ACSL4O60488 711 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 NBNO60934 754 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 RAG1P15918 1043 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 SP100P23497 879 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 KCNQ1P51787 676 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 PLK1P53350 603 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 GALNT3Q14435 633 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 C5orf22Q49AR2 442 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 SDCCAG8Q86SQ7 713 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 CFAP52Q8N1V2 620 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 BRSK1Q8TDC3 778 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 PHF21BQ96EK2 531 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 TRMOQ9BU70 441 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 MAGEH1Q9H213 219 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 MEAF6Q9HAF1 191 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 SCOCQ9UIL1 159 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 DNMT3LQ9UJW3 386 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 RIMKLBQ9ULI2 386 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 CRYL1Q9Y2S2 319 aa16.62■□□□□ 0.25
PRKCSH-217ENST00000592741 MAGEA13PA6NCF6 341 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 PENKP01210 267 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 SLC4A1P02730 911 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 ENO3P13929 434 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 FDXRP22570 491 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 RFTN1Q14699 578 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 ALG1LQ6GMV1 187 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 TMEM207Q6UWW9 146 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 PIM3Q86V86 326 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 KBTBD6Q86V97 674 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 APLFQ8IW19 511 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 PELI3Q8N2H9 469 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 NR1H4Q96RI1 486 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 CDRT15Q96T59 188 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 TMEM175Q9BSA9 504 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 TTPALQ9BTX7 342 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 TTLL2Q9BWV7 592 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms