RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PGLSO95336 258 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
CCBE1-203ENST00000589116 ASLP04424 464 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 PDHA1P08559 390 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 MAGEA12P43365 314 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 PRAMEP78395 509 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 BCL2L1Q07817 233 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 GRM3Q14832 879 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
CCBE1-203ENST00000589116 ATAT1Q5SQI0 421 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 MBLAC2Q68D91 279 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 CES5AQ6NT32 575 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 NEPROQ6NW34 567 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 GLT6D1Q7Z4J2 308 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 ADIPOR2Q86V24 386 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 C2CD4AQ8NCU7 369 aaPredicted RBP12.12□□□□□ -0.47
CCBE1-203ENST00000589116 TCP10LQ8TDR4 215 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 CKAP2Q8WWK9 683 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 MYO19Q96H55 970 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 VPS39Q96JC1 886 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 SRPK1Q96SB4 655 aaKnown RBP12.12□□□□□ -0.47
CCBE1-203ENST00000589116 KLF6Q99612 283 aaPredicted RBP12.12□□□□□ -0.47
CCBE1-203ENST00000589116 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 SLC27A6Q9Y2P4 619 aa12.12□□□□□ -0.47
CCBE1-203ENST00000589116 DENND4AQ7Z401 1863 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 C2orf81A6NN90 581 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 TPP1O14773 563 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 FCARP24071 287 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 SERPINA4P29622 427 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 CCT5P48643 541 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 DGKGP49619 791 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 STK19P49842 368 aaPredicted RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 ZNF140P52738 457 aaPredicted RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 EPHB1P54762 984 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 WDR4P57081 412 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 PPARDQ03181 441 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 LRRC14Q15048 493 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 SMAD1Q15797 465 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 QPCTQ16769 361 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 ZNF470Q6ECI4 717 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 FSTL4Q6MZW2 842 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 ZC3HC1Q86WB0 502 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 NDUFAF2Q8N183 169 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 PDCD6IPQ8WUM4 868 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 SCG3Q8WXD2 468 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 ASIC4Q96FT7 647 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 RPL10LQ96L21 214 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 GPR22Q99680 433 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 C19orf43Q9BQ61 176 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 FAM83CQ9BQN1 747 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 CPEB1Q9BZB8 566 aaKnown RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 ZFP14Q9HCL3 533 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 CD320Q9NPF0 282 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 PCMTD2Q9NV79 361 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 NLE1Q9NVX2 485 aaPredicted RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 EVLQ9UI08 416 aaPredicted RBP12.11□□□□□ -0.47
CCBE1-203ENST00000589116 GGT7Q9UJ14 662 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 FBXO5Q9UKT4 447 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 PCDHB9Q9Y5E1 797 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 SPO11Q9Y5K1 396 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 ARL5AQ9Y689 179 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 DOCK8Q8NF50 2099 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 REV3LO60673 3130 aa12.11□□□□□ -0.47
CCBE1-203ENST00000589116 A0A1W2PQ67 120 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 GOLGA8TH3BQL2 631 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 TRAFD1O14545 582 aaPredicted RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 FAM107AO95990 144 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 PRKCGP05129 697 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 SRPRAP08240 638 aaKnown RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 LPOP22079 712 aaPredicted RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 TYK2P29597 1187 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CRHR1P34998 444 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 NNMTP40261 264 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 SLC1A2P43004 574 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CD151P48509 253 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 RAD51Q06609 339 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 FCHO2Q0JRZ9 810 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 DGKKQ5KSL6 1271 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 HHATQ5VTY9 493 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 TRIM68Q6AZZ1 485 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 LVRNQ6Q4G3 990 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 TAX1BP1Q86VP1 789 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 ETFBKMTQ8IXQ9 262 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 GPR150Q8NGU9 434 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 HDAC10Q969S8 669 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 DNAJC1Q96KC8 554 aaKnown RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 ZNF317Q96PQ6 595 aaPredicted RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 MAGEE1Q9HCI5 957 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 SNX15Q9NRS6 342 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 SLC8A2Q9UPR5 921 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms