RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 NEK11Q8NG66 645 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 CASKIN2Q8WXE0 1202 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 OR1E3Q8WZA6 343 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 NTAN1Q96AB6 310 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 GRAMD1AQ96CP6 724 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 CCDC97Q96F63 343 aaPredicted RBP6.46□□□□□ -1.38
SDF2-205ENST00000587629 PDXPQ96GD0 296 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 CCNL2Q96S94 520 aaPredicted RBP6.46□□□□□ -1.38
SDF2-205ENST00000587629 AGPAT1Q99943 283 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 SLC39A8Q9C0K1 460 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 STRADBQ9C0K7 418 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 RETREG1Q9H6L5 497 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 CATSPERBQ9H7T0 1116 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 CHMP5Q9NZZ3 219 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 PISDQ9UG56 409 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 PCSK1NQ9UHG2 260 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 SIK3Q9Y2K2 1263 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 MFHAS1Q9Y4C4 1052 aa6.46□□□□□ -1.38
SDF2-205ENST00000587629 FLNBO75369 2602 aaKnown RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 TMEM202A6NGA9 273 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 B4DGG1 531 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 B8ZZF3 427 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 D6RAR5 112 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 DFFAO00273 331 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 EEF2KO00418 725 aaKnown RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 TOR1BO14657 336 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 TEX33O43247 280 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 DAPK3O43293 454 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 SLC28A2O43868 658 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 PRAMEF11O60813 436 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 PALMO75781 387 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 RECQL5O94762 991 aaPredicted RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 ITGA2BP08514 1039 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 JMJD7P0C870 316 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ITIH1P19827 911 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 MMP12P39900 470 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 COPB1P53618 953 aaKnown RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 MAPK10P53779 464 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 INHBCP55103 352 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 SKOR1P84550 965 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 UBXN1Q04323 297 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ACOX1Q15067 660 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 CA9Q16790 459 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 AMZ1Q400G9 498 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 PHF19Q5T6S3 580 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 DENND2CQ68D51 928 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 LVRNQ6Q4G3 990 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ARHGAP36Q6ZRI8 547 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 USP53Q70EK8 1073 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 PRICKLE2Q7Z3G6 844 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 CLEC14AQ86T13 490 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 SRLQ86TD4 932 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 VASH2Q86V25 355 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ZFAND4Q86XD8 727 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 CCNJLQ8IV13 435 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 PELI3Q8N2H9 469 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 EXD3Q8N9H8 876 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 OR56A4Q8NGH8 313 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 CCL4L1Q8NHW4 92 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 WDR48Q8TAF3 677 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ENOX1Q8TC92 643 aaKnown RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 SNRNP27Q8WVK2 155 aaKnown RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 FUBP1Q96AE4 644 aaKnown RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 MED8Q96G25 268 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 WBP1Q96G27 269 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 LIN37Q96GY3 246 aaPredicted RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 TBATAQ96M53 351 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 WDR92Q96MX6 357 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ZNF641Q96N77 438 aaPredicted RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 CNPY3Q9BT09 278 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 TMEM168Q9H0V1 697 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 LRRN3Q9H3W5 708 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 DPEP2Q9H4A9 486 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 DHX35Q9H5Z1 703 aaKnown RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 LRRC19Q9H756 370 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ATP13A3Q9H7F0 1226 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 PDFQ9HBH1 243 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 CYP4F12Q9HCS2 524 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 FGF22Q9HCT0 170 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 TAS2R14Q9NYV8 317 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 LRIT1Q9P2V4 623 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 AP4E1Q9UPM8 1137 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 ATP8A1Q9Y2Q0 1164 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 RNF215Q9Y6U7 377 aa6.45□□□□□ -1.38
SDF2-205ENST00000587629 COL27A1Q8IZC6 1860 aaPredicted RBP6.45□□□□□ -1.38
SDF2-205ENST00000587629 KIF26BQ2KJY2 2108 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 RP1P56715 2156 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 ASH1LQ9NR48 2969 aaKnown RBP6.44□□□□□ -1.38
SDF2-205ENST00000587629 PRAMEF33A0A0G2JMD5 474 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 TCRBV5S1A1TA0A578 114 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 TSPAN11A1L157 253 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 GOLGA6CA6NDK9 693 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 GOLGA6BA6NDN3 693 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 CAPN8A6NHC0 703 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 ARHGAP42A6NI28 874 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 WASH4PA8MWX3 477 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 CACNB4O00305 520 aaPredicted RBP6.44□□□□□ -1.38
SDF2-205ENST00000587629 LCE2BO14633 110 aa6.44□□□□□ -1.38
SDF2-205ENST00000587629 FGF10O15520 208 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms