RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 KIAA1024LP59773 190 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 ERVPABLB-1P60509 514 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 SRP54P61011 504 aaKnown RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 SPIDRQ14159 915 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 INPP5AQ14642 412 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 CDKN3Q16667 212 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 SMTNL2Q2TAL5 461 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 TBC1D25Q3MII6 688 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 CCDC122Q5T0U0 273 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 MARC1Q5VT66 337 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 BROXQ5VW32 411 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 E4F1Q66K89 784 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 HGSNATQ68CP4 663 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 ALKBH5Q6P6C2 394 aaKnown RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 C19orf48Q6RUI8 117 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 ENPP7Q6UWV6 458 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 DPPA4Q7L190 304 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 EFL1Q7Z2Z2 1120 aaKnown RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 POLNQ7Z5Q5 900 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 LUZP1Q86V48 1076 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 HID1Q8IV36 788 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 ARFGAP1Q8N6T3 406 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 ZNF248Q8NDW4 579 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 CTNNBL1Q8WYA6 563 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 CSPG4P5Q96PW8 444 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 NUDCD1Q96RS6 583 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 THAP2Q9H0W7 228 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 DEF6Q9H4E7 631 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 WDR26Q9H7D7 661 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 POLR1BQ9H9Y6 1135 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 ZNHIT6Q9NWK9 470 aaKnown RBP11.31□□□□□ -0.6
ACTN4-209ENST00000586538 UVRAGQ9P2Y5 699 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 AMACRQ9UHK6 382 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 DGKBQ9Y6T7 804 aa11.31□□□□□ -0.6
ACTN4-209ENST00000586538 APC2O95996 2303 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 BRINP1O60477 761 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 BUB1BO60566 1050 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 USP12O75317 370 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 DXOO77932 396 aaKnown RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 RECQL5O94762 991 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 CPP00450 1065 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 CYP1A2P05177 515 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 KRT7P08729 469 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 RARAP10276 462 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 TSHRP16473 764 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 RBMS1P29558 406 aaKnown RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 PBX1P40424 430 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 SSR1P43307 286 aaKnown RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 MMP13P45452 471 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 LSSP48449 732 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 GABREP78334 506 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 EIF3IQ13347 325 aaKnown RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ARHGEF7Q14155 803 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ACOX1Q15067 660 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 PDK2Q15119 407 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 WSCD2Q2TBF2 565 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 IGF2-ASQ6U949 168 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 LIPIQ6XZB0 460 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 CYP4V2Q6ZWL3 525 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 USP45Q70EL2 814 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 MARCH9Q86YJ5 346 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 RBFAQ8N0V3 343 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ARL14Q8N4G2 192 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 NPWQ8N729 165 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 OR56A4Q8NGH8 313 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ZNF564Q8TBZ8 553 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 PDCD6IPQ8WUM4 868 aaKnown RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 VOPP1Q96AW1 172 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ZNF830Q96NB3 372 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 LGMNQ99538 433 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 MGME1Q9BQP7 344 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ZNF670Q9BS34 389 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 POLR1EQ9GZS1 481 aaKnown RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 MBNL1Q9NR56 388 aaKnown RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 PHPT1Q9NRX4 125 aaPredicted RBP11.3□□□□□ -0.6
ACTN4-209ENST00000586538 KLF15Q9UIH9 416 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 PADI4Q9UM07 663 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 PHTF1Q9UMS5 762 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 COQ6Q9Y2Z9 468 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
ACTN4-209ENST00000586538 ANKRD36A6QL64 1941 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 URB1O60287 2271 aaKnown RBP11.29□□□□□ -0.6
ACTN4-209ENST00000586538 MYLKQ15746 1914 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 LY6G6EA0A0G2JKS1 128 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 TRAFD1O14545 582 aaPredicted RBP11.29□□□□□ -0.6
ACTN4-209ENST00000586538 MUSKO15146 869 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 YY2O15391 372 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 HTRA2O43464 458 aaPredicted RBP11.29□□□□□ -0.6
ACTN4-209ENST00000586538 H2AFZP0C0S5 128 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 MX2P20592 715 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 VIPR1P32241 457 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 RGRP47804 291 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 SLC25A11Q02978 314 aaKnown RBP11.29□□□□□ -0.6
ACTN4-209ENST00000586538 SLC10A7Q0GE19 358 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 ISXQ2M1V0 245 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 ZFYVE27Q5T4F4 411 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 ARMC12Q5T9G4 340 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 GUSBP11Q6P575 273 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 H2AFVQ71UI9 128 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms