RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CDKN2BP42772 138 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 HNRNPKP61978 463 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMG6-220ENST00000576218 DSC2Q02487 901 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 PPIDQ08752 370 aaKnown RBP15.33■□□□□ 0.04
SMG6-220ENST00000576218 SLC10A2Q12908 348 aaPredicted RBP15.33■□□□□ 0.04
SMG6-220ENST00000576218 KATNAL2Q8IYT4 538 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 SLC22A18ASQ8N1D0 253 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 TEX26Q8N6G2 289 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 MAML1Q92585 1016 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 P3H4Q92791 437 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 HAUS1Q96CS2 278 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 BMFQ96LC9 184 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 KLF6Q99612 283 aaPredicted RBP15.33■□□□□ 0.04
SMG6-220ENST00000576218 BRD8Q9H0E9 1235 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 GOLGA6AQ9NYA3 693 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 PHTF1Q9UMS5 762 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 ANKRD36A6QL64 1941 aa15.33■□□□□ 0.04
SMG6-220ENST00000576218 SPTY2D1-AS1A0A0U1RR47 76 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 RCCD1A6NED2 376 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 NEMP2A6NFY4 417 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 TOR1BO14657 336 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 HTRA2O43464 458 aaPredicted RBP15.32■□□□□ 0.04
SMG6-220ENST00000576218 NRDCO43847 1150 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 CBFA2T3O75081 653 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 RECQL5O94762 991 aaPredicted RBP15.32■□□□□ 0.04
SMG6-220ENST00000576218 PGLSO95336 258 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 CTPS1P17812 591 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 TGM2P21980 687 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 CTNNA2P26232 953 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 PMLP29590 882 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 VIPR1P32241 457 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 TNNT3P45378 269 aaPredicted RBP15.32■□□□□ 0.04
SMG6-220ENST00000576218 NR2C2P49116 596 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 YPEL5P62699 121 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 DAB2P98082 770 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 SHBQ15464 509 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 DBX2Q6ZNG2 339 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 PNPLA1Q8N8W4 532 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 TP53I13Q8NBR0 393 aaPredicted RBP15.32■□□□□ 0.04
SMG6-220ENST00000576218 ATL2Q8NHH9 583 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 EXD1Q8NHP7 514 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 FATE1Q969F0 183 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 CENPTQ96BT3 561 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 FERMT1Q9BQL6 677 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 CEP41Q9BYV8 373 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 MBNL1Q9NR56 388 aaKnown RBP15.32■□□□□ 0.04
SMG6-220ENST00000576218 CABIN1Q9Y6J0 2220 aa15.32■□□□□ 0.04
SMG6-220ENST00000576218 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 CFAP69A5D8W1 941 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 BTNL10A8MVZ5 291 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 CACNB4O00305 520 aaPredicted RBP15.31■□□□□ 0.04
SMG6-220ENST00000576218 ENC1O14682 589 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 HYAL3O43820 417 aaPredicted RBP15.31■□□□□ 0.04
SMG6-220ENST00000576218 JUNDP17535 347 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 DGKAP23743 735 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 CD86P42081 329 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 MARCKSL1P49006 195 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 PFN3P60673 137 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 FZD2Q14332 565 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 WSCD2Q2TBF2 565 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 FAXCQ5TGI0 409 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 LIPIQ6XZB0 460 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 KDM7AQ6ZMT4 941 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 SYCE1Q8N0S2 351 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 UBL4BQ8N7F7 174 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 LPCAT1Q8NF37 534 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 TFB1MQ8WVM0 346 aaKnown RBP15.31■□□□□ 0.04
SMG6-220ENST00000576218 BTN2A2Q8WVV5 523 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 KRT35Q92764 455 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 NUS1Q96E22 293 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 IFT43Q96FT9 208 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 AGAP3Q96P47 875 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 SLC13A1Q9BZW2 595 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 APOBEC3BQ9UH17 382 aaKnown RBP15.31■□□□□ 0.04
SMG6-220ENST00000576218 AMFRQ9UKV5 643 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 DOLKQ9UPQ8 538 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 CHKBQ9Y259 395 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 REXO2Q9Y3B8 237 aaKnown RBP15.31■□□□□ 0.04
SMG6-220ENST00000576218 DUSP10Q9Y6W6 482 aa15.31■□□□□ 0.04
SMG6-220ENST00000576218 hCG_1818297A0A087WSY0 165 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 PIAS2O75928 621 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 ATXN1LP0C7T5 689 aaKnown RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 NME1P15531 152 aaKnown RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 SPINK2P20155 84 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 CTNNA1P35221 906 aaKnown RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 RWDD2BP57060 319 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 IFI35P80217 286 aaPredicted RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 PPARDQ03181 441 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 RALGDSQ12967 914 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 ZBTB17Q13105 803 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 MTM1Q13496 603 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 INPP5AQ14642 412 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 MACC1Q6ZN28 852 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 B4GALNT4Q76KP1 1039 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 RD3Q7Z3Z2 195 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 GLRX5Q86SX6 157 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 ZC3H18Q86VM9 953 aaKnown RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 CHCHD4Q8N4Q1 142 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms