RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 DEFB133Q30KQ1 61 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 PRRT3Q5FWE3 981 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 TPRG1LQ5T0D9 272 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 FAXCQ5TGI0 409 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ZCCHC8Q6NZY4 707 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 BRAT1Q6PJG6 821 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ARHGAP36Q6ZRI8 547 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 SRLQ86TD4 932 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 CAMK1DQ8IU85 385 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 PSTKQ8IV42 348 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ARHGAP12Q8IWW6 846 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 PHACTR4Q8IZ21 702 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 RBFAQ8N0V3 343 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 RNF10Q8N5U6 811 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ARFGAP1Q8N6T3 406 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 NPWQ8N729 165 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 TSEN2Q8NCE0 465 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 BTN2A2Q8WVV5 523 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ASB12Q8WXK4 309 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 TUBGCP5Q96RT8 1024 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 IL12RB2Q99665 862 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 NUP85Q9BW27 656 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 SLC13A1Q9BZW2 595 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ABCG4Q9H172 646 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ISCUQ9H1K1 167 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 PCDH12Q9NPG4 1184 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 CWC15Q9P013 229 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 SPASTQ9UBP0 616 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ANAPC7Q9UJX3 599 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 DOLKQ9UPQ8 538 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 SAR1BQ9Y6B6 198 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ASXL3Q9C0F0 2248 aa9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ZFC3H1O60293 1989 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-216ENST00000574344 ZFYVE26Q68DK2 2539 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 CPED1A4D0V7 1026 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 PJA2O43164 708 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 MT-CO3P00414 261 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 PCCBP05166 539 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 ELFN1P0C7U0 828 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 CTSEP14091 401 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 HTR1BP28222 390 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 SERPINB6P35237 376 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 PCK1P35558 622 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 MMP12P39900 470 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 RGRP47804 291 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 LIG3P49916 1009 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 SCNN1BP51168 640 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 RENBPP51606 427 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 PFN3P60673 137 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 YPEL5P62699 121 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 IL10RBQ08334 325 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 EIF2B5Q13144 721 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 C1orf61Q13536 156 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 DPYSQ14117 519 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 PIGHQ14442 188 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 RFTN1Q14699 578 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 ACAP1Q15027 740 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 TCEA2Q15560 299 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 DPYSL2Q16555 572 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 CDKN3Q16667 212 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 COL28A1Q2UY09 1125 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 TMEM52BQ4KMG9 183 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 HGSNATQ68CP4 663 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 TMCO3Q6UWJ1 677 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 MACC1Q6ZN28 852 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 CYP4V2Q6ZWL3 525 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 BBS5Q8N3I7 341 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 ATPAF2Q8N5M1 289 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 LZTR1Q8N653 840 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 TP53I13Q8NBR0 393 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 IFI44Q8TCB0 444 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 HCAR2Q8TDS4 363 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 PDCD6IPQ8WUM4 868 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 NSMCE1Q8WV22 266 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 GLMNQ92990 594 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 CENPTQ96BT3 561 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 BTBD6Q96KE9 485 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 ZNF641Q96N77 438 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 THAP2Q9H0W7 228 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 SYNDIG1Q9H7V2 258 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 USP29Q9HBJ7 922 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 MBNL1Q9NR56 388 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 NCKIPSDQ9NZQ3 722 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 DKK4Q9UBT3 224 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 SEPT3Q9UH03 358 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 IP6K2Q9UHH9 426 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 KLF15Q9UIH9 416 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 ATP8A1Q9Y2Q0 1164 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 JRKLQ9Y4A0 524 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 GPSM3Q9Y4H4 160 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 CSNK1G3Q9Y6M4 447 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 V9GYY5 206 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 KIF26BQ2KJY2 2108 aa9.73□□□□□ -0.85
NPLOC4-216ENST00000574344 COL27A1Q8IZC6 1860 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 CELSR3Q9NYQ7 3312 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms