RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 WASHC5Q12768 1159 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 GRIK2Q13002 908 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 FGL2Q14314 439 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 NAPEPLDQ6IQ20 393 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 ERAP2Q6P179 960 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 PRPF39Q86UA1 669 aaKnown RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 HCAR2Q8TDS4 363 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 HTR3CQ8WXA8 447 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 TLR10Q9BXR5 811 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 AASDHPPTQ9NRN7 309 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 TPX2Q9ULW0 747 aaKnown RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 SLC6A14Q9UN76 642 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 R3HDM2Q9Y2K5 976 aaKnown RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 A0A1B0GVT2 93 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 GOLGA6L9A6NEM1 432 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 SRRM3A6NNA2 597 aaPredicted RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 HACD1B0YJ81 288 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 RIOK3O14730 519 aaKnown RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 MMP20O60882 483 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 RBP3P10745 1247 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 RBL1P28749 1068 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 SUOXP51687 545 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 RACK1P63244 317 aaKnown RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 FAM193AP78312 1265 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 RALGDSQ12967 914 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 XRCC4Q13426 336 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 ARMC12Q5T9G4 340 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 ADAT2Q7Z6V5 191 aaKnown RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 CDKL3Q8IVW4 592 aaPredicted RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 OR2I1PQ8NGU4 316 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 CXorf40AQ8TE69 158 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 FEM1CQ96JP0 617 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 SMIM14Q96QK8 99 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 RBM15Q96T37 977 aaKnown RBP eCLIP15.9■□□□□ 0.14
CHD3-215ENST00000572750 GTPBP2Q9BX10 602 aaKnown RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 TDRD1Q9BXT4 1180 aaKnown RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 CARD9Q9H257 536 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 KLHL8Q9P2G9 620 aaPredicted RBP15.9■□□□□ 0.14
CHD3-215ENST00000572750 DMTF1Q9Y222 760 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 COQ6Q9Y2Z9 468 aa15.9■□□□□ 0.14
CHD3-215ENST00000572750 A8MX80 341 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 H0Y8X5 98 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 ENC1O14682 589 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 RAD51BO15315 384 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 FOXD2O60548 495 aaPredicted RBP15.89■□□□□ 0.13
CHD3-215ENST00000572750 WNT1P04628 370 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 PDHA1P08559 390 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 C6P13671 934 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 CTPS1P17812 591 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 NFKB1P19838 968 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 SPINK2P20155 84 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 HNRNPA2B1P22626 353 aaKnown RBP15.89■□□□□ 0.13
CHD3-215ENST00000572750 CXCR5P32302 372 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 CD68P34810 354 aaPredicted RBP15.89■□□□□ 0.13
CHD3-215ENST00000572750 GRIA4P48058 902 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 SKOR1P84550 965 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 BNC1Q01954 994 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 PTPRRQ15256 657 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 TEAD4Q15561 434 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 TEX44Q53QW1 395 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 KDM7AQ6ZMT4 941 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 ZNF567Q8N184 647 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 TMEM145Q8NBT3 493 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 SPATA22Q8NHS9 363 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 ATG4AQ8WYN0 398 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 SPOCK2Q92563 424 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 IMP4Q96G21 291 aaKnown RBP15.89■□□□□ 0.13
CHD3-215ENST00000572750 TEKT5Q96M29 485 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 SLC17A9Q9BYT1 436 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 GLOD4Q9HC38 313 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 B4GALT6Q9UBX8 382 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 CHKBQ9Y259 395 aa15.89■□□□□ 0.13
CHD3-215ENST00000572750 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHD3-215ENST00000572750 PRAMEF26H0Y7S4 382 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 ARHGAP33O14559 1287 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 KCNN4O15554 427 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 MTSS1O43312 755 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 FZD6O60353 706 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 TOP3BO95985 862 aaKnown RBP15.88■□□□□ 0.13
CHD3-215ENST00000572750 PAK4O96013 591 aaPredicted RBP15.88■□□□□ 0.13
CHD3-215ENST00000572750 ALPIP09923 528 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 CA4P22748 312 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 CES1P23141 567 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 CD38P28907 300 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 AKT2P31751 481 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 NUDT1P36639 197 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 LIG3P49916 1009 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 CLDN2P57739 230 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 POLR2LP62875 67 aaKnown RBP15.88■□□□□ 0.13
CHD3-215ENST00000572750 PCSK7Q16549 785 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 KIF19Q2TAC6 998 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 TMEM52BQ4KMG9 183 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 ZNF569Q5MCW4 686 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 DARS2Q6PI48 645 aaKnown RBP15.88■□□□□ 0.13
CHD3-215ENST00000572750 GCNT7Q6ZNI0 430 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 DPPA4Q7L190 304 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 SLC13A5Q86YT5 568 aaPredicted RBP15.88■□□□□ 0.13
CHD3-215ENST00000572750 SLC35F6Q8N357 371 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 LPCAT1Q8NF37 534 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 SLC25A51Q9H1U9 297 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms