RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 NRG1Q02297 640 aaPredicted RBP16.28■□□□□ 0.2
RAB40B-206ENST00000571995 LBRQ14739 615 aaKnown RBP16.28■□□□□ 0.2
RAB40B-206ENST00000571995 SCD5Q86SK9 330 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.28■□□□□ 0.2
RAB40B-206ENST00000571995 CDK15Q96Q40 435 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 TTPALQ9BTX7 342 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 FETUBQ9UGM5 382 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 FAM149AA5PLN7 773 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 PPP6CO00743 305 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 PSMD3O43242 534 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 DHRS4L1P0CG22 281 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 PIK3R6Q5UE93 754 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 TXNDC8Q6A555 127 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 DSELQ8IZU8 1212 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 ZNF366Q8N895 744 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 RTL3Q8N8U3 475 aaKnown RBP16.28■□□□□ 0.2
RAB40B-206ENST00000571995 OR6Y1Q8NGX8 325 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 TSPAN17Q96FV3 270 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 EBF2Q9HAK2 575 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 PNPLA8Q9NP80 782 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 RAP2CQ9Y3L5 183 aa16.28■□□□□ 0.2
RAB40B-206ENST00000571995 GABRDO14764 452 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 XRCC1P18887 633 aaPredicted RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 SLC11A1P49279 550 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 ARHGEF7Q14155 803 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 RTP2Q5QGT7 225 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 TAS1R1Q7RTX1 841 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 CAAP1Q9H8G2 361 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 TMEM39AQ9NV64 488 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 POMPQ9Y244 141 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 ZNF839A8K0R7 811 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 RECQLP46063 649 aaPredicted RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 MAPK10P53779 464 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 MLLT6P55198 1093 aaPredicted RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 INHBEP58166 350 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 NIPAL4Q0D2K0 466 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 PCBP1Q15365 356 aaKnown RBP eCLIP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 WLSQ5T9L3 541 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 DDX53Q86TM3 631 aaKnown RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 RBM23Q86U06 439 aaKnown RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 CUZD1Q86UP6 607 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 TMEM173Q86WV6 379 aaPredicted RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 CLDN19Q8N6F1 224 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 TXNDC5Q8NBS9 432 aaKnown RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 EBF3Q9H4W6 596 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 EML4Q9HC35 981 aaKnown RBP16.27■□□□□ 0.2
RAB40B-206ENST00000571995 CASS4Q9NQ75 786 aa16.27■□□□□ 0.2
RAB40B-206ENST00000571995 CCNT2O60583 730 aaKnown RBP16.27■□□□□ 0.19
RAB40B-206ENST00000571995 ATP6V1C1P21283 382 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 HMOX2P30519 316 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 THOP1P52888 689 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 PLOD1Q02809 727 aaPredicted RBP16.27■□□□□ 0.19
RAB40B-206ENST00000571995 BOP1Q14137 746 aaKnown RBP16.27■□□□□ 0.19
RAB40B-206ENST00000571995 HECTD3Q5T447 861 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 LZTR1Q8N653 840 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 CEP70Q8NHQ1 597 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 MYLIPQ8WY64 445 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 GFM2Q969S9 779 aaKnown RBP16.27■□□□□ 0.19
RAB40B-206ENST00000571995 RTP4Q96DX8 246 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.19
RAB40B-206ENST00000571995 PCDHB12Q9Y5F1 795 aa16.27■□□□□ 0.19
RAB40B-206ENST00000571995 CD3EAPO15446 510 aaKnown RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 GOT2P00505 430 aaKnown RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 LTA4HP09960 611 aaKnown RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 KCNA5P22460 613 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 SLC18A1P54219 525 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 BFSP2Q13515 415 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 PAOXQ6QHF9 649 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 ST13P4Q8IZP2 240 aaPredicted RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 NRG4Q8WWG1 115 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 CATSPERZQ9NTU4 200 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 TMEM88BA6NKF7 163 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 MRASO14807 208 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 FGF10O15520 208 aaPredicted RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 ALPIP09923 528 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 TACR2P21452 398 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 AQP4P55087 323 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 MS4A13Q5J8X5 152 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 C16orf89Q6UX73 402 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 FBXO39Q8N4B4 442 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 NTAN1Q96AB6 310 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 RTP3Q9BQQ7 232 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 CORO1BQ9BR76 489 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 ZFP14Q9HCL3 533 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 EVLQ9UI08 416 aaPredicted RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 LRCH1Q9Y2L9 728 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 CCDC162PA2VCL2 907 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 PSMD12O00232 456 aaPredicted RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 ENPP3O14638 875 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 ADAM12O43184 909 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 MAFKO60675 156 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 SLC35E2BP0CK96 405 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 CDK7P50613 346 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 HSPA14Q0VDF9 509 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 CLLU1OSQ5K130 101 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 RARS2Q5T160 578 aaKnown RBP16.26■□□□□ 0.19
RAB40B-206ENST00000571995 ANO7Q6IWH7 933 aa16.26■□□□□ 0.19
RAB40B-206ENST00000571995 MFN1Q8IWA4 741 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms