RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 TTC13Q8NBP0 860 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 ZNF397Q8NF99 534 aaPredicted RBP8.72□□□□□ -1.01
SMG1-216ENST00000569122 OR6K2Q8NGY2 324 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 PDXPQ96GD0 296 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 SPRY4Q9C004 299 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 TMEM168Q9H0V1 697 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 MAGEH1Q9H213 219 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 SYNCQ9H7C4 482 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 RMND1Q9NWS8 449 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 KCTD5Q9NXV2 234 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMG1-216ENST00000569122 PDP2Q9P2J9 529 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 MAP4K5Q9Y4K4 846 aa8.72□□□□□ -1.01
SMG1-216ENST00000569122 FBN2P35556 2912 aa8.71□□□□□ -1.01
SMG1-216ENST00000569122 POLR1CO15160 346 aaPredicted RBP8.71□□□□□ -1.02
SMG1-216ENST00000569122 GRAP2O75791 330 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 STK17BO94768 372 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 PCCBP05166 539 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 GKP32189 559 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 STAT5AP42229 794 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 LEPRP48357 1165 aaKnown RBP8.71□□□□□ -1.02
SMG1-216ENST00000569122 MAPKAPK2P49137 400 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 PPM1FP49593 454 aaPredicted RBP8.71□□□□□ -1.02
SMG1-216ENST00000569122 PMS2P54278 862 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 SLC6A3Q01959 620 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 LRRC63Q05C16 580 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 DPYDQ12882 1025 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 UGP2Q16851 508 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 KRTAP21-3Q3LHN1 58 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 INO80DQ53TQ3 878 aaPredicted RBP8.71□□□□□ -1.02
SMG1-216ENST00000569122 BRAT1Q6PJG6 821 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 RRAGAQ7L523 313 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 LYSMD3Q7Z3D4 306 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 HPS6Q86YV9 775 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 APLFQ8IW19 511 aaPredicted RBP8.71□□□□□ -1.02
SMG1-216ENST00000569122 OR10G6Q8NH81 332 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 PRR7Q8TB68 274 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 OR1E3Q8WZA6 343 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 NPY6RQ99463 290 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 NCAPGQ9BPX3 1015 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 TTYH3Q9C0H2 523 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 PIGVQ9NUD9 493 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 TRNAU1APQ9NX07 287 aaKnown RBP8.71□□□□□ -1.02
SMG1-216ENST00000569122 OCIAD1Q9NX40 245 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 MOSPD1Q9UJG1 213 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 TLK1Q9UKI8 766 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 RCOR1Q9UKL0 485 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 G3BP2Q9UN86 482 aaKnown RBP8.71□□□□□ -1.02
SMG1-216ENST00000569122 PCDHGB7Q9Y5F8 929 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 RPS6KL1Q9Y6S9 549 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 C2CD3Q4AC94 2353 aa8.71□□□□□ -1.02
SMG1-216ENST00000569122 CENPEQ02224 2701 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 IGHV1OR21-1A0A087WYE8 117 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 A0A1B0GVL5 298 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 PRSS38A1L453 326 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 TMEM202A6NGA9 273 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 HNRNPRO43390 633 aaKnown RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 ECEL1O95672 775 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 CD160O95971 181 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 FGF1P05230 155 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 PFKFB1P16118 471 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 NR1D1P20393 614 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 ERCC5P28715 1186 aaPredicted RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 TRIM23P36406 574 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 SULT1E1P49888 294 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 LIG3P49916 1009 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 PGDP52209 483 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 MAZP56270 477 aaKnown RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 EIF2S3LQ2VIR3 472 aaKnown RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 SLC25A52Q3SY17 297 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 COBLL1Q53SF7 1204 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 C1QL3Q5VWW1 255 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 WDR74Q6RFH5 385 aaPredicted RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 OLFML1Q6UWY5 402 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 DRC7Q8IY82 874 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 UNC5BQ8IZJ1 945 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 BMPERQ8N8U9 685 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 KAT5Q92993 513 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 PMEPA1Q969W9 287 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 FUBP1Q96AE4 644 aaKnown RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 C5orf34Q96MH7 638 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 CEP63Q96MT8 703 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 ZNF641Q96N77 438 aaPredicted RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 CPXM1Q96SM3 734 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 STN1Q9H668 368 aaKnown RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 WDR26Q9H7D7 661 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 FGF22Q9HCT0 170 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 PCDH12Q9NPG4 1184 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 SPATS2LQ9NUQ6 558 aaKnown RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 TAAR2Q9P1P5 351 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 SLC5A6Q9Y289 635 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 COQ6Q9Y2Z9 468 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 DAAM1Q9Y4D1 1078 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 PCDHGA9Q9Y5G4 932 aaKnown RBP8.7□□□□□ -1.02
SMG1-216ENST00000569122 LRRK1Q38SD2 2015 aa8.7□□□□□ -1.02
SMG1-216ENST00000569122 BUB1O43683 1085 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 KDELR3O43731 214 aa8.69□□□□□ -1.02
SMG1-216ENST00000569122 RAMP2O60895 175 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms