RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CEP97Q8IW35 865 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 KDM1BQ8NB78 822 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 CCDC124Q96CT7 223 aaKnown RBP17.83■□□□□ 0.44
CMTM3-214ENST00000567572 IMP4Q96G21 291 aaKnown RBP17.83■□□□□ 0.44
CMTM3-214ENST00000567572 BTN2A3PQ96KV6 586 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 LBHD1Q9BQE6 289 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-214ENST00000567572 C11orf49Q9H6J7 331 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 EML4Q9HC35 981 aaKnown RBP17.83■□□□□ 0.44
CMTM3-214ENST00000567572 MPP6Q9NZW5 540 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 ZDHHC2Q9UIJ5 367 aa17.83■□□□□ 0.44
CMTM3-214ENST00000567572 SOD2P04179 222 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 RBP1P09455 135 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 HOXB8P17481 243 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 SAT1P21673 171 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 EPHA3P29320 983 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 GLRBP48167 497 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 PAPOLAP51003 745 aaKnown RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 TAS2R39P59534 338 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 DEFB103AP81534 67 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 RING1Q06587 406 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 CTBP1Q13363 440 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 MSLNQ13421 630 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 KLC3Q6P597 504 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 MIB1Q86YT6 1006 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 SLC39A11Q8N1S5 342 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 ATP6V0D2Q8N8Y2 350 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 CATSPER1Q8NEC5 780 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 PEX13Q92968 403 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 NXNL1Q96CM4 212 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 ZNF558Q96NG5 402 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 CLSTN3Q9BQT9 956 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 TRMOQ9BU70 441 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 NUF2Q9BZD4 464 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 WDR55Q9H6Y2 383 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 EFCAB1Q9HAE3 211 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 MRPL40Q9NQ50 206 aaKnown RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 UTP6Q9NYH9 597 aaKnown RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 PSMD13Q9UNM6 376 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 NYNRINQ9P2P1 1898 aaKnown RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 IGLV3-10A0A075B6K4 115 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 SLC7A4O43246 635 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 SKAP2O75563 359 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 FESP07332 822 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 AVPR1AP37288 418 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 TUFMP49411 452 aaKnown RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 WNT3AP56704 352 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 PFKPQ01813 784 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 MTA1Q13330 715 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 LAMB3Q13751 1172 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 MAPRE2Q15555 327 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 TECRLQ5HYJ1 363 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 TSTD2Q5T7W7 516 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 KIAA1841Q6NSI8 718 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 TMCO2Q7Z6W1 182 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 SLC22A9Q8IVM8 553 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 MFSD6LQ8IWD5 586 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 DSELQ8IZU8 1212 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 CEP70Q8NHQ1 597 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 PAWRQ96IZ0 340 aaKnown RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 SHCBP1LQ9BZQ2 653 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 CCSER2Q9H7U1 834 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 TMEM248Q9NWD8 314 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 HSFX1Q9UBD0 423 aa17.82■□□□□ 0.44
CMTM3-214ENST00000567572 AFF4Q9UHB7 1163 aaKnown RBP17.82■□□□□ 0.44
CMTM3-214ENST00000567572 H3BNX3 289 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 AHCYL1O43865 530 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 TLR5O60602 858 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 PMPCBO75439 489 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 ABLIM3O94929 683 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 PEX11BO96011 259 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 TIMP1P01033 207 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 F7P08709 466 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-214ENST00000567572 UQCRBP14927 111 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 RAG1P15918 1043 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 SERPINH1P50454 418 aaKnown RBP17.81■□□□□ 0.44
CMTM3-214ENST00000567572 PIGGQ5H8A4 983 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 TCHHL1Q5QJ38 904 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-214ENST00000567572 OGFRL1Q5TC84 451 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-214ENST00000567572 GDPD5Q8WTR4 605 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 OMDQ99983 421 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 HERC2P3Q9BVR0 1158 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 ZYG11BQ9C0D3 744 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 NOL6Q9H6R4 1146 aaKnown RBP17.81■□□□□ 0.44
CMTM3-214ENST00000567572 TRPC7Q9HCX4 862 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 IGSF5Q9NSI5 407 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 DOCK4Q8N1I0 1966 aa17.81■□□□□ 0.44
CMTM3-214ENST00000567572 MKI67P46013 3256 aaKnown RBP17.81■□□□□ 0.44
CMTM3-214ENST00000567572 SLC12A8A0AV02 714 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TRIM43BA6NCK2 446 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 NEMP1O14524 444 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 SEC24AO95486 1093 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 LTA4HP09960 611 aaKnown RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 CSF2RAP15509 400 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 WDR5P61964 334 aaKnown RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 DLG1Q12959 904 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 MED21Q13503 144 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 BTG3Q14201 252 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 ACAP2Q15057 778 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 RNF111Q6ZNA4 994 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 AGR3Q8TD06 166 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms