RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 C20orf27Q9GZN8 174 aa11.4□□□□□ -0.58
LINC00562-201ENST00000566385 MANSC1Q9H8J5 431 aa11.4□□□□□ -0.58
LINC00562-201ENST00000566385 SLC28A3Q9HAS3 691 aa11.4□□□□□ -0.58
LINC00562-201ENST00000566385 BPIFA1Q9NP55 256 aa11.4□□□□□ -0.58
LINC00562-201ENST00000566385 CCDC162PA2VCL2 907 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 OTOL1A6NHN0 477 aaPredicted RBP11.4□□□□□ -0.59
LINC00562-201ENST00000566385 GPR39O43194 453 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 TIMM44O43615 452 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 FZD6O60353 706 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 EDF1O60869 148 aaKnown RBP11.4□□□□□ -0.59
LINC00562-201ENST00000566385 GLP2RO95838 553 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 ALADP13716 330 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 CTPS1P17812 591 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 CDKN1CP49918 316 aaPredicted RBP11.4□□□□□ -0.59
LINC00562-201ENST00000566385 ACVR1Q04771 509 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 IFT88Q13099 833 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 USP10Q14694 798 aaKnown RBP11.4□□□□□ -0.59
LINC00562-201ENST00000566385 RGS9BPQ6ZS82 235 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 OTOAQ7RTW8 1153 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 GLT6D1Q7Z4J2 308 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 CCDC63Q8NA47 563 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 OR4K2Q8NGD2 314 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 ACMSDQ8TDX5 336 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 ABHD8Q96I13 439 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 GDF15Q99988 308 aa11.4□□□□□ -0.59
LINC00562-201ENST00000566385 FNDC3AQ9Y2H6 1198 aaKnown RBP11.4□□□□□ -0.59
LINC00562-201ENST00000566385 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.39□□□□□ -0.59
LINC00562-201ENST00000566385 FAM95CA0A1B0GW59 222 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.39□□□□□ -0.59
LINC00562-201ENST00000566385 ZNF197O14709 1029 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 SLC35E2BP0CK96 405 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 SERPINB8P50452 374 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 SEMG2Q02383 582 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 RARS2Q5T160 578 aaKnown RBP11.39□□□□□ -0.59
LINC00562-201ENST00000566385 C6orf89Q6UWU4 347 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 ATG14Q6ZNE5 492 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 ADIPOR2Q86V24 386 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 ZSWIM9Q86XI8 627 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 NPAS3Q8IXF0 933 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 CACNA2D3Q8IZS8 1091 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 OTUD6BQ8N6M0 293 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 GPATCH11Q8N954 259 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 CDKN2AIPNLQ96HQ2 116 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 CABS1Q96KC9 395 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 GGA2Q9UJY4 613 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 CRYL1Q9Y2S2 319 aa11.39□□□□□ -0.59
LINC00562-201ENST00000566385 ARIH1Q9Y4X5 557 aaPredicted RBP11.39□□□□□ -0.59
LINC00562-201ENST00000566385 A8MX80 341 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 TRAFD1O14545 582 aaPredicted RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 SLC7A4O43246 635 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 PLIN3O60664 434 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 ZNF140P52738 457 aaPredicted RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 PLK1P53350 603 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 TAS2R39P59534 338 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 SLC14A2Q15849 920 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 GEN1Q17RS7 908 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 SPRED3Q2MJR0 410 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 FAM78AQ5JUQ0 283 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 RAPH1Q70E73 1250 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 CLEC14AQ86T13 490 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 C12orf40Q86WS4 652 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 PIH1D2Q8WWB5 315 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 FGF13Q92913 245 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 MOCOSQ96EN8 888 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 OLFM1Q99784 485 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 OMDQ99983 421 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 MFSD1Q9H3U5 465 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 HAUS2Q9NVX0 235 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 DCDC2Q9UHG0 476 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 DPP7Q9UHL4 492 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 HGSO14964 777 aaPredicted RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 GLRA3O75311 464 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 S1PR4O95977 384 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 PABPC1P11940 636 aaKnown RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 NEFHP12036 1026 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 CES1P23141 567 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 GLRBP48167 497 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 LEPRP48357 1165 aaKnown RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 CD151P48509 253 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 CENPLQ8N0S6 344 aaPredicted RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 RYBPQ8N488 228 aaPredicted RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 STYXQ8WUJ0 223 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 FAM167BQ9BTA0 163 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 C1QTNF1Q9BXJ1 281 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 ADGRE3Q9BY15 652 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 NSMCE4AQ9NXX6 385 aa11.38□□□□□ -0.59
LINC00562-201ENST00000566385 CPSF2Q9P2I0 782 aaKnown RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 NUP210Q8TEM1 1887 aaPredicted RBP11.38□□□□□ -0.59
LINC00562-201ENST00000566385 RPP40O75818 363 aaKnown RBP11.37□□□□□ -0.59
LINC00562-201ENST00000566385 PROCP04070 461 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 BPGMP07738 259 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 DLG1Q12959 904 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 PCLAFQ15004 111 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 DHCR24Q15392 516 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 CHI3L2Q15782 390 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 GET4Q7L5D6 327 aaPredicted RBP11.37□□□□□ -0.59
LINC00562-201ENST00000566385 SPATA21Q7Z572 469 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 NUDCD3Q8IVD9 361 aa11.37□□□□□ -0.59
LINC00562-201ENST00000566385 TMEM151AQ8N4L1 468 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms