RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PHEXP78562 749 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 FRG1Q14331 258 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 FASTKD5Q7L8L6 764 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 RAB44Q7Z6P3 723 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TFAP2DQ7Z6R9 452 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TMEM126BQ8IUX1 230 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 ISL2Q96A47 359 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 C12orf43Q96C57 262 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 ERLEC1Q96DZ1 483 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 CORO1BQ9BR76 489 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 KIFC1Q9BW19 673 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 ING2Q9H160 280 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 PLGRKTQ9HBL7 147 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 UTP6Q9NYH9 597 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 VPS28Q9UK41 221 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 WDR37Q9Y2I8 494 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 UBA6A0AVT1 1052 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 NCF1BA6NI72 391 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 NCF1CA8MVU1 366 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 AP3B1O00203 1094 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 SIX3O95343 332 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 NCF1P14598 390 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 MAP4P27816 1152 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 KCTD11Q693B1 232 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 C14orf80Q86SX3 495 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 CAMK1DQ8IU85 385 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 GABPB2Q8TAK5 448 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 ADNPQ9H2P0 1102 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 CXorf21Q9HAI6 301 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 OLAHQ9NV23 265 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 WARS2Q9UGM6 360 aaKnown RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 MTF2Q9Y483 593 aaPredicted RBP11.87□□□□□ -0.51
ABCA3-203ENST00000563623 TCAF1Q9Y4C2 921 aa11.87□□□□□ -0.51
ABCA3-203ENST00000563623 A0A087X1B8 175 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 MSI1O43347 362 aaKnown RBP11.86□□□□□ -0.51
ABCA3-203ENST00000563623 RBP1P09455 135 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 LINC00032P0C843 101 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 BDNFP23560 247 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 YWHAHQ04917 246 aaPredicted RBP11.86□□□□□ -0.51
ABCA3-203ENST00000563623 GALNT2Q10471 571 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 PFKFB4Q16877 469 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 ZNF554Q86TJ5 538 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 PIM3Q86V86 326 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
ABCA3-203ENST00000563623 ZNF597Q96LX8 424 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 OLFM1Q99784 485 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 ADI1Q9BV57 179 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 SMOXQ9NWM0 555 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.86□□□□□ -0.51
ABCA3-203ENST00000563623 OAZ3Q9UMX2 235 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 CASTOR2A6NHX0 329 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 LRRC14BA6NHZ5 514 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 TMX2-CTNND1H3BSU7 103 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 CNMDO75829 334 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 TRAF2Q12933 501 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 NFYCQ13952 458 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 HMBOX1Q6NT76 420 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 TAC4Q86UU9 113 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 TMEM151AQ8N4L1 468 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 PTGR2Q8N8N7 351 aaPredicted RBP11.86□□□□□ -0.51
ABCA3-203ENST00000563623 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 OSBPL6Q9BZF3 934 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 WDR6Q9NNW5 1121 aaKnown RBP11.86□□□□□ -0.51
ABCA3-203ENST00000563623 DERAQ9Y315 318 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 NDUFAF1Q9Y375 327 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 A0A1W2PPW3 197 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 PIRO00625 290 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 F9P00740 461 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 FYNP06241 537 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 PIRTP0C851 137 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 WNT3AP56704 352 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 LRP8Q14114 963 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 TMEM26Q6ZUK4 368 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 GET4Q7L5D6 327 aaPredicted RBP11.86□□□□□ -0.51
ABCA3-203ENST00000563623 DHRSXQ8N5I4 330 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 TRPC4APQ8TEL6 797 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 CCDC126Q96EE4 140 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 TSPAN17Q96FV3 270 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 KLHL5Q96PQ7 755 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 SMOQ99835 787 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 PRM3Q9NNZ6 103 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
ABCA3-203ENST00000563623 HSPA1AP0DMV8 641 aaKnown RBP11.85□□□□□ -0.51
ABCA3-203ENST00000563623 HSPA1BP0DMV9 641 aaKnown RBP11.85□□□□□ -0.51
ABCA3-203ENST00000563623 TMED10P49755 219 aaKnown RBP11.85□□□□□ -0.51
ABCA3-203ENST00000563623 POU4F1Q01851 419 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 ANKDD1AQ495B1 522 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 SCN4BQ8IWT1 228 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 RIN3Q8TB24 985 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 LZICQ8WZA0 190 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 HDAC10Q969S8 669 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 EMID1Q96A84 441 aaPredicted RBP11.85□□□□□ -0.51
ABCA3-203ENST00000563623 SLCO4A1Q96BD0 722 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 ISOC1Q96CN7 298 aa11.85□□□□□ -0.51
ABCA3-203ENST00000563623 C19orf60Q96EN9 201 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms