RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ITIH2P19823 946 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 GRIA4P48058 902 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 LIMK1P53667 647 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 RPS21P63220 83 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 BNC1Q01954 994 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 LMNB2Q03252 620 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 NIPAL4Q0D2K0 466 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 AP1B1Q10567 949 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 WASHC5Q12768 1159 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TRAF2Q12933 501 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ZNF211Q13398 564 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 FGL2Q14314 439 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ZNF284Q2VY69 593 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TMEM52BQ4KMG9 183 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TEX44Q53QW1 395 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 SEL1L3Q68CR1 1132 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 KIAA1161Q6NSJ0 714 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MRPL14Q6P1L8 145 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MEIOBQ8N635 442 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TRIM58Q8NG06 486 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ACTL9Q8TC94 416 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TFB1MQ8WVM0 346 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ASB12Q8WXK4 309 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TADA1Q96BN2 335 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 FEM1CQ96JP0 617 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TEKT5Q96M29 485 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TLR10Q9BXR5 811 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TM9SF3Q9HD45 589 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ITM2BQ9Y287 266 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PPIL1Q9Y3C6 166 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PI4KAP42356 2102 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 SHROOM3Q8TF72 1996 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 LAMA1P25391 3075 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 RALGAPA1Q6GYQ0 2036 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 HACD1B0YJ81 288 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MTSS1O43312 755 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TJP3O95049 919 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PCDH8O95206 1070 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PGLSO95336 258 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PRLP01236 227 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 WNT1P04628 370 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PDHA1P08559 390 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PTPN3P26045 913 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MAT2AP31153 395 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MMP12P39900 470 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 CETN2P41208 172 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 POLR2LP62875 67 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 OTUD4Q01804 1114 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 DSC2Q02487 901 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ELP6Q0PNE2 266 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 RALGDSQ12967 914 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 SETMARQ53H47 684 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 LRRC73Q5JTD7 316 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ZNF787Q6DD87 383 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 NAPEPLDQ6IQ20 393 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 B4GALNT4Q76KP1 1039 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TRIM46Q7Z4K8 759 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PRPF39Q86UA1 669 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ZC3H18Q86VM9 953 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 CBARPQ8N350 705 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PIH1D2Q8WWB5 315 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 SNX19Q92543 992 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 HAUS1Q96CS2 278 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 SLC6A18Q96N87 628 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 QKIQ96PU8 341 aaKnown RBP eCLIP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 ALS2CR12Q96Q35 445 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MCCC1Q96RQ3 725 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 VAT1Q99536 393 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 KLF6Q99612 283 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 NUSAP1Q9BXS6 441 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 TDRD1Q9BXT4 1180 aaKnown RBP6.23□□□□□ -1.41
CNOT1-204ENST00000563130 SLC17A9Q9BYT1 436 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 MIR1-1HGQ9H1L0 117 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 CARD9Q9H257 536 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 PCDH12Q9NPG4 1184 aa6.23□□□□□ -1.41
CNOT1-204ENST00000563130 DCHS1Q96JQ0 3298 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 TCRBV7S2A1N4TA0A589 114 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 CFAP69A5D8W1 941 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 PRAMEF26H0Y7S4 382 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 VILLO15195 856 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 PAK4O96013 591 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-204ENST00000563130 CFIP05156 583 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 ENGP17813 658 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 HNRNPA2B1P22626 353 aaKnown RBP6.22□□□□□ -1.41
CNOT1-204ENST00000563130 CD38P28907 300 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 CD68P34810 354 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-204ENST00000563130 CSNK1EP49674 416 aaKnown RBP6.22□□□□□ -1.41
CNOT1-204ENST00000563130 ARHGAP8P85298 464 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 RPS6KA1Q15418 735 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 SLC14A2Q15849 920 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 SLC45A4Q5BKX6 768 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 FAM182AQ5T1J6 154 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 IQCHQ86VS3 1027 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 C12orf50Q8NA57 414 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-204ENST00000563130 HTR3CQ8WXA8 447 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 SCRN2Q96FV2 425 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 IMP4Q96G21 291 aaKnown RBP6.22□□□□□ -1.41
CNOT1-204ENST00000563130 SERAC1Q96JX3 654 aa6.22□□□□□ -1.41
CNOT1-204ENST00000563130 LENG8Q96PV6 779 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms