RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CCT4P50991 539 aaKnown RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 BLKP51451 505 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 CLCNKBP51801 687 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 UFM1P61960 85 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 EFNB1P98172 346 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 PMPCAQ10713 525 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 SREBF2Q12772 1141 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 GRAPQ13588 217 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 KRT32Q14532 448 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 ARHGEF6Q15052 776 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 TSTQ16762 297 aaKnown RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 ZNF793Q6ZN11 406 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 UBE2Q1Q7Z7E8 422 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 GALNT16Q8N428 558 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 AGBL3Q8NEM8 1001 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 ETNPPLQ8TBG4 499 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 GRAPLQ8TC17 118 aaPredicted RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 FAR1Q8WVX9 515 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 KLHL29Q96CT2 875 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 TUBB6Q9BUF5 446 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 GATA5Q9BWX5 397 aaPredicted RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 SPRTNQ9H040 489 aaPredicted RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 IL21RQ9HBE5 538 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 MOV10Q9HCE1 1003 aaKnown RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 Q9N2J8 555 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 PAPOLBQ9NRJ5 636 aaKnown RBP3.95□□□□□ -1.78
HERC1-215ENST00000561436 DIAPH3Q9NSV4 1193 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 TBC1D22BQ9NU19 505 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 FLRT1Q9NZU1 646 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 SARDHQ9UL12 918 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 ZNF609O15014 1411 aa3.95□□□□□ -1.78
HERC1-215ENST00000561436 CYP2D7A0A087X1C5 515 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 ANKRD18BA2A2Z9 1011 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 C2CD4BA6NLJ0 364 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 SERPINC1P01008 464 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 HSPA5P11021 654 aaKnown RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 KELP23276 732 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 FMO4P31512 558 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 NF2P35240 595 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 HARS2P49590 506 aaKnown RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 RARSP54136 660 aaKnown RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 GOLGA8DPQ0D2H9 430 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 PTP4A2Q12974 167 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 HNRNPA0Q13151 305 aaKnown RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 SEMA3AQ14563 771 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 HLFQ16534 295 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 EARS2Q5JPH6 523 aaKnown RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 SUSD4Q5VX71 490 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 HAUS3Q68CZ6 603 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 NCAPH2Q6IBW4 605 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 TMEM81Q6P7N7 255 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 AAGABQ6PD74 315 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 TMTC3Q6ZXV5 915 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 H1FNTQ75WM6 255 aaPredicted RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 TADA2BQ86TJ2 420 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 WDR5BQ86VZ2 330 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 ARL14EPQ8N8R7 260 aaPredicted RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 EXD3Q8N9H8 876 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 SETD9Q8NE22 299 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 CENPIQ92674 756 aaPredicted RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 MPHOSPH8Q99549 860 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 GLIS2Q9BZE0 524 aaPredicted RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 LMAN2LQ9H0V9 348 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 SEMA4BQ9NPR2 832 aaPredicted RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 GRHL1Q9NZI5 618 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 PEMTQ9UBM1 199 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 ZNF70Q9UC06 446 aaPredicted RBP3.94□□□□□ -1.78
HERC1-215ENST00000561436 ICKQ9UPZ9 632 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 CLDN16Q9Y5I7 305 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 KIAA1551Q9HCM1 1747 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 UBR3Q6ZT12 1888 aa3.94□□□□□ -1.78
HERC1-215ENST00000561436 NRXN2Q9P2S2 1712 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 PGPEP1LA6NFU8 196 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 UGDHO60701 494 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 TIPRLO75663 272 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SEC14L2O76054 403 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 TMCC1O94876 653 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 DDAH2O95865 285 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 ADAP00813 363 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 CLEC3BP05452 202 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 URODP06132 367 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SPARCP09486 303 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 HOXB7P09629 217 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 UBL4AP11441 157 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 CDK4P11802 303 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 EPHA8P29322 1005 aaPredicted RBP3.93□□□□□ -1.78
HERC1-215ENST00000561436 PRKAR2BP31323 418 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 PTGER1P34995 402 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 DCAF7P61962 342 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SETQ01105 290 aaPredicted RBP3.93□□□□□ -1.78
HERC1-215ENST00000561436 ID2Q02363 134 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 PRICKLE4Q2TBC4 344 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 Q4G0T1 1027 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 KIAA1755Q5JYT7 1200 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 ITPRIPL1Q6GPH6 555 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 TMED8Q6PL24 325 aaPredicted RBP3.93□□□□□ -1.78
HERC1-215ENST00000561436 GSTA5Q7RTV2 222 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 GLCCI1Q86VQ1 547 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 TMC8Q8IU68 726 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 DDIASQ8IXT1 998 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms