RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 FAM72DQ6L9T8 149 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 STRADAQ7RTN6 431 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 ZNF438Q7Z4V0 828 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 FAM72BQ86X60 149 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 DNAAF5Q86Y56 855 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 RWDD2AQ9UIY3 292 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 TMEM202A6NGA9 273 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 GOLGA8SH3BPF8 625 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 PCCBP05166 539 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 FGF3P11487 239 aaPredicted RBP18.64■□□□□ 0.57
TPM1-226ENST00000560959 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
TPM1-226ENST00000560959 MMP12P39900 470 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 ARSDP51689 593 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 SQSTM1Q13501 440 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 SKIDA1Q1XH10 827 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 NYAP1Q6ZVC0 841 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 IL22RA1Q8N6P7 574 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 CCDC112Q8NEF3 446 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 CENPIQ92674 756 aaPredicted RBP18.64■□□□□ 0.57
TPM1-226ENST00000560959 FUBP1Q96AE4 644 aaKnown RBP18.64■□□□□ 0.57
TPM1-226ENST00000560959 PSMG3-AS1Q96PY0 264 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 NCAPGQ9BPX3 1015 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 TMEM168Q9H0V1 697 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 NOL6Q9H6R4 1146 aaKnown RBP18.64■□□□□ 0.57
TPM1-226ENST00000560959 FGF22Q9HCT0 170 aa18.64■□□□□ 0.57
TPM1-226ENST00000560959 TEX15Q9BXT5 2789 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 B4DGG1 531 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 PDE2AO00408 941 aaPredicted RBP18.63■□□□□ 0.57
TPM1-226ENST00000560959 BIN1O00499 593 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 PNMA6AP0CW24 399 aaPredicted RBP18.63■□□□□ 0.57
TPM1-226ENST00000560959 UGT1A3P35503 534 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 PTPN9P43378 593 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 GPR3P46089 330 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 CCDC14Q49A88 953 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 ZNF354CQ86Y25 554 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 CREBRFQ8IUR6 639 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 FAM26EQ8N5C1 309 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 PLA2G15Q8NCC3 412 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 NTAN1Q96AB6 310 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 TUBGCP5Q96RT8 1024 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 DPYSL5Q9BPU6 564 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 DDA1Q9BW61 102 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 ASPSCR1Q9BZE9 553 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 RDH14Q9HBH5 336 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 LHX3Q9UBR4 397 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 MAN2B2Q9Y2E5 1009 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 ATP8A1Q9Y2Q0 1164 aa18.63■□□□□ 0.57
TPM1-226ENST00000560959 IGHV5-10-1A0A0J9YXX1 117 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 ZNF891A8MT65 544 aaPredicted RBP18.62■□□□□ 0.57
TPM1-226ENST00000560959 AGRPO00253 132 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 INSIG1O15503 277 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 PIGNO95427 931 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 LIFP15018 202 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 SDC4P31431 198 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 LIMK2P53671 638 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 CYTH1Q15438 398 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 IGFBP7Q16270 282 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 PARP15Q460N3 678 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 C2CD6Q53TS8 623 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 DPY19L2P1Q6NXN4 242 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 SFTPA2Q8IWL1 248 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 EMC1Q8N766 993 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 RTL3Q8N8U3 475 aaKnown RBP18.62■□□□□ 0.57
TPM1-226ENST00000560959 AGBL5Q8NDL9 886 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 OR4D9Q8NGE8 314 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 RXFP2Q8WXD0 754 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 JPH3Q8WXH2 748 aaPredicted RBP18.62■□□□□ 0.57
TPM1-226ENST00000560959 SLC45A3Q96JT2 553 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 LRP4O75096 1905 aa18.62■□□□□ 0.57
TPM1-226ENST00000560959 RHPN2P1A8MT19 583 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 WASH4PA8MWX3 477 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 RECQL5O94762 991 aaPredicted RBP18.61■□□□□ 0.57
TPM1-226ENST00000560959 CCNB1P14635 433 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 CD1CP29017 333 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 ALDH4A1P30038 563 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 CSNK1DP48730 415 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 OR1D5P58170 312 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 NOMO3P69849 1222 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 PEX6Q13608 980 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 NCAPHQ15003 741 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 CDO1Q16878 200 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 C15orf59Q2T9L4 293 aaPredicted RBP18.61■□□□□ 0.57
TPM1-226ENST00000560959 AMZ1Q400G9 498 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 RAB6CQ53S08 254 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 CFAP58Q5T655 872 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 CCL4L1Q8NHW4 92 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 CPA5Q8WXQ8 436 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 NUDT22Q9BRQ3 303 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 MAGEB5Q9BZ81 275 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 KLC2Q9H0B6 622 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 RAB6CQ9H0N0 254 aa18.61■□□□□ 0.57
TPM1-226ENST00000560959 MRPL40Q9NQ50 206 aaKnown RBP18.61■□□□□ 0.57
TPM1-226ENST00000560959 METTL5Q9NRN9 209 aaKnown RBP18.61■□□□□ 0.57
TPM1-226ENST00000560959 SPATS2LQ9NUQ6 558 aaKnown RBP18.61■□□□□ 0.57
TPM1-226ENST00000560959 NBPF19A0A087WUL8 3843 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 C2CD4BA6NLJ0 364 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 B4E171 279 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 RASA4BC9J798 803 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 RASA4O43374 803 aa18.6■□□□□ 0.57
TPM1-226ENST00000560959 BUB1BO60566 1050 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms