RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 CCNYL1Q8N7R7 359 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 LSMEM1Q8N8F7 131 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 SLC43A3Q8NBI5 491 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 PAPD5Q8NDF8 572 aaKnown RBP6.68□□□□□ -1.34
ZEB1-217ENST00000559858 DYNC2LI1Q8TCX1 351 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 STYXQ8WUJ0 223 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 OSCP1Q8WVF1 389 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 TTC9Q92623 222 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 GLMNQ92990 594 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 MFSD3Q96ES6 412 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 UBXN10Q96LJ8 280 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 AGAP4Q96P64 663 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 BDH2Q9BUT1 245 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 MUC13Q9H3R2 512 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 DSN1Q9H410 356 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 SLA2Q9H6Q3 261 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 EIF2B3Q9NR50 452 aaKnown RBP6.68□□□□□ -1.34
ZEB1-217ENST00000559858 DDX28Q9NUL7 540 aaKnown RBP6.68□□□□□ -1.34
ZEB1-217ENST00000559858 FKBP14Q9NWM8 211 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 SYBUQ9NX95 663 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 SEPT9Q9UHD8 586 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-217ENST00000559858 EGFL7Q9UHF1 273 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 ANAPC2Q9UJX6 822 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 RUVBL2Q9Y230 463 aaKnown RBP6.68□□□□□ -1.34
ZEB1-217ENST00000559858 CAB39Q9Y376 341 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-217ENST00000559858 MAU2Q9Y6X3 613 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 PMF1-BGLAPU3KQ54 211 aa6.68□□□□□ -1.34
ZEB1-217ENST00000559858 ARID2Q68CP9 1835 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 CENPXA8MT69 81 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 BBIP1A8MTZ0 92 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 FAM25AB3EWG3 89 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 FAM25CB3EWG5 89 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 FAM25GB3EWG6 89 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 TMEM233B4DJY2 109 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 TCP10L2B9ZVM9 353 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 H0Y858 1186 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 CDK2AP1O14519 115 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 INPP4BO15327 924 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 DLX3O60479 287 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 INMTO95050 263 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ZBTB7AO95365 584 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ITGBL1O95965 494 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 CHRNA1P02708 482 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SBK3P0C264 359 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 OXTRP30559 389 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 NR2C2P49116 596 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ATP4BP51164 291 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 GP2P55259 537 aaKnown RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 PPP2R2BQ00005 443 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 FCHO2Q0JRZ9 810 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 PSMD5Q16401 504 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SMU1Q2TAY7 513 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ADPRMQ3LIE5 342 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SH3PXD2AQ5TCZ1 1133 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 BSPRYQ5W0U4 402 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 HEATR6Q6AI08 1181 aaKnown RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 DESI1Q6ICB0 168 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ZNF544Q6NX49 715 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 NEK5Q6P3R8 708 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 CES3Q6UWW8 571 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 PRSS48Q7RTY5 328 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 PODNQ7Z5L7 613 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 HACE1Q8IYU2 909 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 NDNFQ8TB73 568 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.67□□□□□ -1.342e-7■■■■■ 62.8
ZEB1-217ENST00000559858 QKIQ96PU8 341 aaKnown RBP eCLIP6.67□□□□□ -1.343e-7■■■■■ 45.7
ZEB1-217ENST00000559858 NODALQ96S42 347 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 TMEM246Q9BRR3 403 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SLC39A3Q9BRY0 314 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 RPAP3Q9H6T3 665 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 TLR9Q9NR96 1032 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 GTSE1Q9NYZ3 720 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ABCD2Q9UBJ2 740 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 KCNN3Q9UGI6 736 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 TCEAL9Q9UHQ7 104 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SLCO3A1Q9UIG8 710 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 NDUFAF1Q9Y375 327 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SPEF1Q9Y4P9 236 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 A0A0A0MRY4 1105 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ZNF487B1APH4 448 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ARPC2O15144 300 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 NDST3O95803 873 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 KRT19P08727 400 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 HTR1AP08908 422 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 THRBP10828 461 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SPNP16150 400 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 PDGFRAP16234 1089 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 DNAJB1P25685 340 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 PKLRP30613 574 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 RRM2P31350 389 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 ALDH3A2P51648 485 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 JAK3P52333 1124 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 TPD52P55327 224 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 SOX10P56693 466 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 GALK2Q01415 458 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 FRG1Q14331 258 aaKnown RBP6.67□□□□□ -1.34
ZEB1-217ENST00000559858 DUSP7Q16829 419 aa6.67□□□□□ -1.34
ZEB1-217ENST00000559858 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms