RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SLC27A5Q9Y2P5 690 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 VWA7Q9Y334 891 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 PTGDR2Q9Y5Y4 395 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 E7ENX8 843 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 FBP2O00757 339 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 AHCYL1O43865 530 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 S1PR4O95977 384 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 NDST2P52849 883 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 CDH13P55290 713 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PRAMEP78395 509 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 XIAPP98170 497 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PDAP1Q13442 181 aaKnown RBP10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PTK2BQ14289 1009 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 GK3PQ14409 553 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 SEMA3AQ14563 771 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 AGKQ53H12 422 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 MFSD14CQ5VZR4 134 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 REP15Q6BDI9 236 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 UGT2A3Q6UWM9 527 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 EP400NLQ6ZTU2 488 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 MON1AQ86VX9 555 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 OR52K2Q8NGK3 314 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 BLOC1S5Q8TDH9 187 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PTERQ96BW5 349 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 DNAJC1Q96KC8 554 aaKnown RBP10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PPP1R2P1Q96PQ5 205 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 RANBP9Q96S59 729 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 ZFYVE28Q9HCC9 887 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 VPS45Q9NRW7 570 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 C6orf203Q9P0P8 240 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-216ENST00000559819 VPS28Q9UK41 221 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PCDHGA7Q9Y5G6 932 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 ARL5AQ9Y689 179 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 MROH6A6NGR9 719 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PPP6CO00743 305 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 ACOT8O14734 319 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 UBDO15205 165 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 LDB2O43679 373 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PEX1O43933 1283 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 SUPT7LO94864 414 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 FLT3LGP49771 235 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 NME5P56597 212 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 FASTKQ14296 549 aaKnown RBP10.08□□□□□ -0.8
LRRC28-216ENST00000559819 TRIM71Q2Q1W2 868 aaKnown RBP10.08□□□□□ -0.8
LRRC28-216ENST00000559819 MAP3K21Q5TCX8 1036 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 MSANTD2Q6P1R3 559 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 KLC3Q6P597 504 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 ZNF549Q6P9A3 640 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 CYHR1Q6ZMK1 362 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 OR13C4Q8NGS5 318 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 CALML6Q8TD86 181 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 UBXN10Q96LJ8 280 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 ZIC5Q96T25 663 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 SEMA3CQ99985 751 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 MFSD1Q9H3U5 465 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 MEAF6Q9HAF1 191 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 PAPOLBQ9NRJ5 636 aaKnown RBP10.08□□□□□ -0.8
LRRC28-216ENST00000559819 UBAP1Q9NZ09 502 aa10.08□□□□□ -0.8
LRRC28-216ENST00000559819 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-216ENST00000559819 C15orf38-AP3S2A0A0A6YYH1 394 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 MYOCOSA0A1B0GUC4 107 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SLC12A8A0AV02 714 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SEPT4O43236 478 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 DNAJA2O60884 412 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 RNASEH2AO75792 299 aaKnown RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 BCAS2O75934 225 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 GOT2P00505 430 aaKnown RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 RBP1P09455 135 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ETS2P15036 469 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ADSLP30566 484 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 IRX1P78414 480 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 TIAL1Q01085 375 aaKnown RBP eCLIP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 CAP1Q01518 475 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ACAP2Q15057 778 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 UNC50Q53HI1 259 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 VARS2Q5ST30 1063 aaKnown RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 RASIP1Q5U651 963 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SLC30A9Q6PML9 568 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 PAOXQ6QHF9 649 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 CHSY3Q70JA7 882 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ARPINQ7Z6K5 226 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ISCA2Q86U28 154 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 DCP1BQ8IZD4 617 aaKnown RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ST13P4Q8IZP2 240 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 GALNT4Q8N4A0 578 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 STON2Q8WXE9 905 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 FBXO32Q969P5 355 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ATP6V1E2Q96A05 226 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 TSPAN17Q96FV3 270 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 C3orf30Q96M34 536 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 RPRD1AQ96P16 312 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 MRPL1Q9BYD6 325 aaKnown RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 RGS18Q9NS28 235 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 CACNA2D2Q9NY47 1150 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 TRAF6Q9Y4K3 522 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 TRIM38O00635 465 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SLC7A4O43246 635 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 TRPA1O75762 1119 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms