RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 B8ZZF3 427 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 PRAMEF11O60813 436 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 SLC5A2P31639 672 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 UGT1A5P35504 534 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 CSNK1DP48730 415 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 KIAA1024LP59773 190 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 TPI1P60174 286 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 CCL7P80098 99 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 SYCP1Q15431 976 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 TCEA2Q15560 299 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 ZSCAN23Q3MJ62 389 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 KCTD16Q68DU8 428 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 NYAP1Q6ZVC0 841 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 RAB11FIP2Q7L804 512 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 FOXP3Q9BZS1 431 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 ATP13A3Q9H7F0 1226 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 DONSONQ9NYP3 566 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
TPM1-220ENST00000559556 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 APPL1Q9UKG1 709 aa13.18□□□□□ -0.3
TPM1-220ENST00000559556 USP9YO00507 2555 aaPredicted RBP13.18□□□□□ -0.3
TPM1-220ENST00000559556 J3KR12 359 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 BUB1BO60566 1050 aaPredicted RBP13.17□□□□□ -0.3
TPM1-220ENST00000559556 PCCBP05166 539 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 RPLP0P05388 317 aaKnown RBP13.17□□□□□ -0.3
TPM1-220ENST00000559556 PNLIPP16233 465 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 SERPINA4P29622 427 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 RGRP47804 291 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 COPB1P53618 953 aaKnown RBP13.17□□□□□ -0.3
TPM1-220ENST00000559556 INHBCP55103 352 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 RALGDSQ12967 914 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 RD3Q7Z3Z2 195 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 SRLQ86TD4 932 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 CAMK1DQ8IU85 385 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 CCNJLQ8IV13 435 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 FBXO39Q8N4B4 442 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 TSEN2Q8NCE0 465 aaKnown RBP13.17□□□□□ -0.3
TPM1-220ENST00000559556 NEK11Q8NG66 645 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 ECHDC3Q96DC8 303 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 TMEM74Q96NL1 305 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 FGF22Q9HCT0 170 aa13.17□□□□□ -0.3
TPM1-220ENST00000559556 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 ARHGAP42A6NI28 874 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 LGALS16A8MUM7 142 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
TPM1-220ENST00000559556 NVLO15381 856 aaKnown RBP13.16□□□□□ -0.3
TPM1-220ENST00000559556 EFSO43281 561 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 NOBOXO60393 691 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 TNFP01375 233 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 HOXC4P09017 264 aaPredicted RBP13.16□□□□□ -0.3
TPM1-220ENST00000559556 GLB1P16278 677 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 OGDHQ02218 1023 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 AFMIDQ63HM1 303 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 OGFOD3Q6PK18 319 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 LIPIQ6XZB0 460 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 SPRED1Q7Z699 444 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 JAMLQ86YT9 394 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 OR56A4Q8NGH8 313 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 OR1E3Q8WZA6 343 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
TPM1-220ENST00000559556 ERGIC2Q96RQ1 377 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
TPM1-220ENST00000559556 AGPAT1Q99943 283 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
TPM1-220ENST00000559556 AP4E1Q9UPM8 1137 aa13.16□□□□□ -0.3
TPM1-220ENST00000559556 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.3
TPM1-220ENST00000559556 TNFRSF10CO14798 259 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 RECQL5O94762 991 aaPredicted RBP13.15□□□□□ -0.3
TPM1-220ENST00000559556 PRKCGP05129 697 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 ELFN1P0C7U0 828 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 JMJD7P0C870 316 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 LIPCP11150 499 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 HGFP14210 728 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 DESP17661 470 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 GM2AP17900 193 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 KELP23276 732 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 TRIM23P36406 574 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 PAPOLAP51003 745 aaKnown RBP13.15□□□□□ -0.3
TPM1-220ENST00000559556 ZFP36L1Q07352 338 aaKnown RBP13.15□□□□□ -0.3
TPM1-220ENST00000559556 HLTFQ14527 1009 aaKnown RBP eCLIP13.15□□□□□ -0.3
TPM1-220ENST00000559556 C14orf28Q4W4Y0 310 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
TPM1-220ENST00000559556 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 ARHGAP12Q8IWW6 846 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 MCOLN2Q8IZK6 566 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 TMEM159Q96B96 161 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 CELF6Q96J87 481 aaKnown RBP13.15□□□□□ -0.3
TPM1-220ENST00000559556 SLC39A8Q9C0K1 460 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 GPATCH2LQ9NWQ4 482 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 LIMA1Q9UHB6 759 aaKnown RBP13.15□□□□□ -0.3
TPM1-220ENST00000559556 PIKFYVEQ9Y2I7 2098 aa13.15□□□□□ -0.3
TPM1-220ENST00000559556 EEF2KO00418 725 aaKnown RBP13.14□□□□□ -0.31
TPM1-220ENST00000559556 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms