RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PRIMA1Q86XR5 153 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 HPS6Q86YV9 775 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 PARP9Q8IXQ6 854 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 OR6K2Q8NGY2 324 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 ZNF507Q8TCN5 953 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 CXorf40AQ8TE69 158 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 CT55Q8WUE5 264 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 IRGQQ8WZA9 623 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 KCNK17Q96T54 332 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 LLPHQ9BRT6 129 aaKnown RBP9.46□□□□□ -0.9
NEDD1-211ENST00000557454 WRAP53Q9BUR4 548 aaKnown RBP9.46□□□□□ -0.9
NEDD1-211ENST00000557454 C2orf49Q9BVC5 232 aaPredicted RBP9.46□□□□□ -0.9
NEDD1-211ENST00000557454 IMPG2Q9BZV3 1241 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 PDP2Q9P2J9 529 aa9.46□□□□□ -0.9
NEDD1-211ENST00000557454 ARHGEF17Q96PE2 2063 aaPredicted RBP9.45□□□□□ -0.9
NEDD1-211ENST00000557454 A6NL46 340 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 KCNN4O15554 427 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 KIAA0754O94854 1291 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 PCCBP05166 539 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 FGF1P05230 155 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 ITIH2P19823 946 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 GGCXP38435 758 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 RAPSNQ13702 412 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 CRB2Q5IJ48 1285 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 TGIF2LYQ8IUE0 185 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 OR56A4Q8NGH8 313 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 INPP5DQ92835 1189 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 ARHGEF26Q96DR7 871 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 ILKAPQ9H0C8 392 aaPredicted RBP9.45□□□□□ -0.9
NEDD1-211ENST00000557454 SUDS3Q9H7L9 328 aaPredicted RBP9.45□□□□□ -0.9
NEDD1-211ENST00000557454 CISHQ9NSE2 258 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 HESX1Q9UBX0 185 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 CCDC39Q9UFE4 941 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 G3BP2Q9UN86 482 aaKnown RBP9.45□□□□□ -0.9
NEDD1-211ENST00000557454 B3GNT3Q9Y2A9 372 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 PCDHGB6Q9Y5F9 930 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 PRRC2AP48634 2157 aaKnown RBP9.45□□□□□ -0.9
NEDD1-211ENST00000557454 VPS13CQ709C8 3753 aa9.45□□□□□ -0.9
NEDD1-211ENST00000557454 ABCA4P78363 2273 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 A0A1B0GUH1 482 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 FAM221AA4D161 298 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 KCNU1A8MYU2 1149 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 ZNF185O15231 689 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 RHOCP08134 193 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TRIM49P0CI25 452 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TRIM49CP0CI26 452 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 KLK2P20151 261 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 GARSP41250 739 aaKnown RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 PRSS12P56730 875 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 IRX6P78412 446 aaPredicted RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 GPLD1P80108 840 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TLE4Q04727 773 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 SKOR2Q2VWA4 1001 aaPredicted RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 ZNF805Q5CZA5 627 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 CARD16Q5EG05 197 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 C1orf220Q5T0J3 134 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 NRROSQ86YC3 692 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 C12orf56Q8IXR9 622 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 ATP6V0D2Q8N8Y2 350 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 DCAF4L2Q8NA75 395 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 AHCYL2Q96HN2 611 aaKnown RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 BACH2Q9BYV9 841 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TM6SF2Q9BZW4 377 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 AGPAT4Q9NRZ5 378 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 SIDT1Q9NXL6 827 aaKnown RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 GPR83Q9NYM4 423 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TAAR2Q9P1P5 351 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TFIP11Q9UBB9 837 aaKnown RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 KLHL3Q9UH77 587 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 USP25Q9UHP3 1055 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 LNPEPQ9UIQ6 1025 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 MOSPD1Q9UJG1 213 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 VANGL2Q9ULK5 521 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 TBC1D30Q9Y2I9 924 aa9.44□□□□□ -0.9
NEDD1-211ENST00000557454 FCF1Q9Y324 198 aaKnown RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
NEDD1-211ENST00000557454 A0A0D9SEW6 157 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 C21orf140B9A014 251 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 CLDN11O75508 207 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 NDUFA10O95299 355 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 ADCY5O95622 1261 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 UGT2B4P06133 528 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 STSP08842 583 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 SETSIPP0DME0 302 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 CCNB1P14635 433 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 GLRBP48167 497 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 PITX1P78337 314 aaPredicted RBP9.43□□□□□ -0.9
NEDD1-211ENST00000557454 EFHC1Q5JVL4 640 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 FAM26FQ5R3K3 315 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 SYPL2Q5VXT5 272 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 PMF1Q6P1K2 205 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 Q71RC1 249 aaPredicted RBP9.43□□□□□ -0.9
NEDD1-211ENST00000557454 KCNMB4Q86W47 210 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 NAGSQ8N159 534 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
NEDD1-211ENST00000557454 PCDH20Q8N6Y1 951 aaKnown RBP9.43□□□□□ -0.9
NEDD1-211ENST00000557454 PLA2G15Q8NCC3 412 aa9.43□□□□□ -0.9
NEDD1-211ENST00000557454 CHTF18Q8WVB6 975 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms