RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 NSMCE3Q96MG7 304 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 LGMNQ99538 433 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 DNAJC28Q9NX36 388 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 DNPEPQ9ULA0 475 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 TFR2Q9UP52 801 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 TTLL3Q9Y4R7 772 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 CABIN1Q9Y6J0 2220 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 TRPM6Q9BX84 2022 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 PLXNA2O75051 1894 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 CCDC66A2RUB6 948 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 PSMD11O00231 422 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 CST8O60676 142 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 PRKCGP05129 697 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 C1SP09871 688 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 FTH1P19P0C7X4 201 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 DGKAP23743 735 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 VIPR1P32241 457 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 BLKP51451 505 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 RPL26P61254 145 aaKnown RBP15.4■□□□□ 0.06
SHMT2-204ENST00000553324 IFI35P80217 286 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-204ENST00000553324 TRAF2Q12933 501 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 ZNF211Q13398 564 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-204ENST00000553324 FZD2Q14332 565 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 WSCD2Q2TBF2 565 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 SPOCD1Q6ZMY3 1216 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 SYCE1Q8N0S2 351 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 EID2Q8N6I1 236 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 UBE2Q2Q8WVN8 375 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 ADAMTS14Q8WXS8 1223 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 P3H4Q92791 437 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 OLFM3Q96PB7 478 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 IL12RB2Q99665 862 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 DUSP23Q9BVJ7 150 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 MBNL1Q9NR56 388 aaKnown RBP15.4■□□□□ 0.06
SHMT2-204ENST00000553324 SALL4Q9UJQ4 1053 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 RPL26L1Q9UNX3 145 aaKnown RBP15.4■□□□□ 0.06
SHMT2-204ENST00000553324 EFR3BQ9Y2G0 817 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 REXO2Q9Y3B8 237 aaKnown RBP15.4■□□□□ 0.06
SHMT2-204ENST00000553324 PCDHGA1Q9Y5H4 931 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 PCDHA3Q9Y5H8 950 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 DUSP10Q9Y6W6 482 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 NCOR2Q9Y618 2525 aa15.4■□□□□ 0.06
SHMT2-204ENST00000553324 RCCD1A6NED2 376 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 KCNK1O00180 336 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 MTSS1O43312 755 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 FZD6O60353 706 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 PIAS2O75928 621 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 RECQL5O94762 991 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 HOXC4P09017 264 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 NME1P15531 152 aaKnown RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 CTNNA1P35221 906 aaKnown RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 IGFALSP35858 605 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 EPHB1P54762 984 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 DYNLT1P63172 113 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 RALGDSQ12967 914 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 MTM1Q13496 603 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 ARHGEF7Q14155 803 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 INPP5AQ14642 412 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 ACOX1Q15067 660 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 IRF4Q15306 451 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 KAZNQ674X7 775 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 MACC1Q6ZN28 852 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 KANSL1Q7Z3B3 1105 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 TMEM139Q8IV31 216 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 CCDC50Q8IVM0 306 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 RAVER1Q8IY67 606 aaKnown RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 SLC25A45Q8N413 288 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 TFB1MQ8WVM0 346 aaKnown RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 CNDP2Q96KP4 475 aaKnown RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 TBATAQ96M53 351 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 MCCC1Q96RQ3 725 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-204ENST00000553324 LACRTQ9GZZ8 138 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 EVA1BQ9NVM1 165 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 B4GALT6Q9UBX8 382 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 COQ6Q9Y2Z9 468 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 CSNK1G3Q9Y6M4 447 aa15.39■□□□□ 0.05
SHMT2-204ENST00000553324 PDE2AO00408 941 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-204ENST00000553324 ENC1O14682 589 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 SCAMP1O15126 338 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 SDC3O75056 442 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 HEXIM1O94992 359 aaKnown RBP15.38■□□□□ 0.05
SHMT2-204ENST00000553324 HLA-DQB2P05538 268 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 JUNDP17535 347 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 KELP23276 732 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 RWDD2BP57060 319 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 DSC2Q02487 901 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 ILKQ13418 452 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 TEX44Q53QW1 395 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 NPNTQ6UXI9 565 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 RAB44Q7Z6P3 723 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-204ENST00000553324 SLCO6A1Q86UG4 719 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 CBARPQ8N350 705 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-204ENST00000553324 ACRBPQ8NEB7 543 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 ARRDC2Q8TBH0 407 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 PIH1D2Q8WWB5 315 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 FERMT1Q9BQL6 677 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 APOOQ9BUR5 198 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 ADGRE3Q9BY15 652 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 SLC13A1Q9BZW2 595 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms