RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SPAG4Q9NPE6 437 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 PNRC2Q9NPJ4 139 aaKnown RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 SETD4Q9NVD3 440 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 WSB2Q9NYS7 404 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 CPSF2Q9P2I0 782 aaKnown RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 NDRG3Q9UGV2 375 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 PTRH2Q9Y3E5 179 aaKnown RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 CEPT1Q9Y6K0 416 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 SLC4A4Q9Y6R1 1079 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 ZNF644Q9H582 1327 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 A0A0U1RQF3 1178 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 FAM170AA1A519 330 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 HSPB6O14558 160 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 PAPSS1O43252 624 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 KLK8O60259 260 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 UGDHO60701 494 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 TPPPO94811 219 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 HSPA4LO95757 839 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 ETFAP13804 333 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 IL7RP16871 459 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 PON1P27169 355 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 EEF1DP29692 281 aaKnown RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 CLCN5P51795 746 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 STAT2P52630 851 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 PPP5CP53041 499 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 TFAP4Q01664 338 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 NAB2Q15742 525 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 MIDNQ504T8 468 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 SGO1Q5FBB7 561 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 TCP11X2Q5H9J9 407 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 C1orf141Q5JVX7 400 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 ENTPD8Q5MY95 495 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 C6orf141Q5SZD1 244 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 HECTD3Q5T447 861 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 MEX3CQ5U5Q3 659 aaKnown RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 ADALQ6DHV7 355 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 NOXA1Q86UR1 476 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 KBTBD6Q86V97 674 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 DDIASQ8IXT1 998 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 POGLUT1Q8NBL1 392 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 HJURPQ8NCD3 748 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 LRRC59Q96AG4 307 aaKnown RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 PGAP3Q96FM1 320 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 ZC3HAV1LQ96H79 300 aaKnown RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 C1QTNF1Q9BXJ1 281 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 OSGEPL1Q9H4B0 414 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 PLK3Q9H4B4 646 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 MVB12BQ9H7P6 319 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 ERVMER34-1Q9H9K5 563 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 PAPOLBQ9NRJ5 636 aaKnown RBP5.2□□□□□ -1.58
SCFD1-209ENST00000553280 TAB2Q9NYJ8 693 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 ZNF112Q9UJU3 913 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 PADI1Q9ULC6 663 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 RAP2CQ9Y3L5 183 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 A3GALT2U3KPV4 340 aa5.2□□□□□ -1.58
SCFD1-209ENST00000553280 LOC100509620A0A075B734 347 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 KIR2DS5A0A0G2JLQ3 304 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 hCG_1809904A0A1W2PP81 198 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 A0A1W2PPE2 198 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 A0A1W2PR64 198 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 A8MXE2 369 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 KIR2DS3K7RE56 304 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ADAMDEC1O15204 470 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 MITFO75030 526 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-209ENST00000553280 RFC1P35251 1148 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-209ENST00000553280 CLCN3P51790 818 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 PNLIPRP2P54317 469 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 CFHR1Q03591 330 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ACSM2AQ08AH3 577 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 C15orf59Q2T9L4 293 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ACSM2BQ68CK6 577 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 CES5AQ6NT32 575 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 LCTLQ6UWM7 567 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 SEPT14Q6ZU15 432 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 DENND6AQ8IWF6 608 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 WDR63Q8IWG1 891 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 HACE1Q8IYU2 909 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 TDRD5Q8NAT2 981 aaKnown RBP5.19□□□□□ -1.58
SCFD1-209ENST00000553280 FBXL8Q96CD0 374 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ZNF419Q96HQ0 510 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ZNF333Q96JL9 665 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 MRPL1Q9BYD6 325 aaKnown RBP5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ARHGEF38Q9NXL2 777 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ANKRD10Q9NXR5 420 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 AGO2Q9UKV8 859 aaKnown RBP5.19□□□□□ -1.58
SCFD1-209ENST00000553280 CMAHPQ9Y471 501 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 CCL27Q9Y4X3 112 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 MAU2Q9Y6X3 613 aa5.19□□□□□ -1.58
SCFD1-209ENST00000553280 ATP2C2O75185 946 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 PROP1O75360 226 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 C1QL1O75973 258 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 QDPRP09417 244 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 MYZAPP0CAP1 466 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 ACTN1P12814 892 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 ENO3P13929 434 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-209ENST00000553280 TNFSF8P32971 234 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 CAPZA2P47755 286 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 RAD23AP54725 363 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 ITGADQ13349 1161 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 ZNF268Q14587 947 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms