RNA–Protein interactions for RNA: ENST00000553009.5

COPZ1-217, Transcript of coatomer protein complex subunit zeta 1, human

TSL 3

Gene COPZ1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPZ1-217	ENST00000553009	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.81	□□□□□ -0.2
COPZ1-217	ENST00000553009	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.81	□□□□□ -0.2
COPZ1-217	ENST00000553009	HACD3	Q9P035	362 aa		13.81	□□□□□ -0.2
COPZ1-217	ENST00000553009	ZNF711	Q9Y462	761 aa		13.81	□□□□□ -0.2
COPZ1-217	ENST00000553009	TCAF1	Q9Y4C2	921 aa		13.81	□□□□□ -0.2
COPZ1-217	ENST00000553009	SPO11	Q9Y5K1	396 aa		13.81	□□□□□ -0.2
COPZ1-217	ENST00000553009	TEX264	Q9Y6I9	313 aa		13.81	□□□□□ -0.2
COPZ1-217	ENST00000553009	HEATR9	A2RTY3	570 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	DNTT	P04053	509 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	H2AFX	P16104	143 aa	Predicted RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	PGAM1	P18669	254 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	NDUFV2	P19404	249 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	C5AR1	P21730	350 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	ABL2	P42684	1182 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	MAGEA4	P43358	317 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	RPS9	P46781	194 aa	Known RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	DGKE	P52429	567 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	GAS6	Q14393	721 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	UGP2	Q16851	508 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	TTC31	Q49AM3	519 aa	Predicted RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	PCID2	Q5JVF3	399 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	ARMC3	Q5W041	872 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	FBXL19	Q6PCT2	694 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	ERN2	Q76MJ5	926 aa	Known RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	TMPRSS6	Q8IU80	811 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	RELL1	Q8IUW5	271 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	PYROXD1	Q8WU10	500 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	PTCD2	Q8WV60	388 aa	Known RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	CLDN23	Q96B33	292 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	SCRN2	Q96FV2	425 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	CFAP36	Q96G28	342 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	C9orf72	Q96LT7	481 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	RANBP9	Q96S59	729 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	EBNA1BP2	Q99848	306 aa	Known RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	NAT9	Q9BTE0	207 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	HDAC8	Q9BY41	377 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	SLC6A17	Q9H1V8	727 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	CHRD	Q9H2X0	955 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	PABPC3	Q9H361	631 aa	Known RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	MAGEE1	Q9HCI5	957 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	POLM	Q9NP87	494 aa	Predicted RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	SOX13	Q9UN79	622 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	PPIL1	Q9Y3C6	166 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	SIT1	Q9Y3P8	196 aa		13.8	□□□□□ -0.2
COPZ1-217	ENST00000553009	C1orf232	A0A0U1RR37	186 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	PLK4	O00444	970 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	CRTAM	O95727	393 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	CYP2A6	P11509	494 aa	Predicted RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	ADRB3	P13945	408 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	TIMP2	P16035	220 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	ADRA1D	P25100	572 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	DRD3	P35462	400 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	HNF1B	P35680	557 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	MMP12	P39900	470 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	P2RY2	P41231	377 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	PMS2	P54278	862 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	CNTN1	Q12860	1018 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	MSLN	Q13421	630 aa	Predicted RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	PTPRR	Q15256	657 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	CWF19L1	Q69YN2	538 aa	Known RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	ERAP2	Q6P179	960 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	FBXO38	Q6PIJ6	1188 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	LYSMD3	Q7Z3D4	306 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	TTC7B	Q86TV6	843 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	CCNJL	Q8IV13	435 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	IGDCC3	Q8IVU1	814 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	AADAT	Q8N5Z0	425 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	MDGA1	Q8NFP4	955 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	BRSK1	Q8TDC3	778 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	SIPA1	Q96FS4	1042 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	MRGPRX1	Q96LB2	322 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	TTC25	Q96NG3	672 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	LYSMD1	Q96S90	227 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	SRPK1	Q96SB4	655 aa	Known RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	TRIM56	Q9BRZ2	755 aa	Known RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	KIFC1	Q9BW19	673 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	TXLNGY	Q9BZA5	131 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	TRABD	Q9H4I3	376 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	MRM3	Q9HC36	420 aa	Known RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	PCDH12	Q9NPG4	1184 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	NINJ2	Q9NZG7	142 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	B4GALT6	Q9UBX8	382 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	SCML1	Q9UN30	329 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	ARL5A	Q9Y689	179 aa		13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.79	□□□□□ -0.2
COPZ1-217	ENST00000553009	SCN8A	Q9UQD0	1980 aa		13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009	TRIO	O75962	3097 aa		13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009	FAM237B	A0A1B0GVD1	139 aa		13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009		A0A1W2PP55	124 aa		13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009	CCDC78	A2IDD5	438 aa		13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009	RNASEH2A	O75792	299 aa	Known RBP	13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009	PDGFB	P01127	241 aa	Predicted RBP	13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009	DCN	P07585	359 aa	Known RBP	13.78	□□□□□ -0.2
COPZ1-217	ENST00000553009	ACADM	P11310	421 aa		13.78	□□□□□ -0.2

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