RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 USP45Q70EL2 814 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 B4GALNT4Q76KP1 1039 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 DPPA4Q7L190 304 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 SPOCK2Q92563 424 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 NSMCE3Q96MG7 304 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 QKIQ96PU8 341 aaKnown RBP eCLIP18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 LENG8Q96PV6 779 aaPredicted RBP18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 ELF4Q99607 663 aaPredicted RBP18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 B4GALT6Q9UBX8 382 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 TMEM131Q92545 1883 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 KCNK3O14649 394 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 RAD51BO15315 384 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 YKT6O15498 198 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 PYGMP11217 842 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 CD86P42081 329 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 ZNF211Q13398 564 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 INAVAQ3KP66 663 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 SEL1L2Q5TEA6 688 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 ZNF662Q6ZS27 426 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 ABI3BPQ7Z7G0 1075 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 OR13H1Q8NG92 308 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 ARRDC2Q8TBH0 407 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 ACTL9Q8TC94 416 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 TDRD1Q9BXT4 1180 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 KLHL8Q9P2G9 620 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 PPP2R2CQ9Y2T4 447 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 COQ6Q9Y2Z9 468 aa18.57■□□□□ 0.56
PRPF40B-216ENST00000552301 CFAP69A5D8W1 941 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 A8MX80 341 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 PTPN3P26045 913 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 VIPR1P32241 457 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 RABIFP47224 123 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 NOVA1P51513 510 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 OTUD4Q01804 1114 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 NIPAL4Q0D2K0 466 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 RALGDSQ12967 914 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 XRCC4Q13426 336 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 ARHGEF7Q14155 803 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 NOMO1Q15155 1222 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 TEX44Q53QW1 395 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 Q6ZSR6 202 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 DCP2Q8IU60 420 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 CDKL3Q8IVW4 592 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 CNTD1Q8N815 330 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 HES6Q96HZ4 224 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 VAT1Q99536 393 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 ERVMER34-1Q9H9K5 563 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 CHKBQ9Y259 395 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 PCDHGB2Q9Y5G2 931 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 DNAH14Q0VDD8 3507 aa18.56■□□□□ 0.56
PRPF40B-216ENST00000552301 A0A1B0GTQ1 180 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 POM121BA6NF01 834 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 TM4SF5O14894 197 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 DDX3YO15523 660 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 FLRT2O43155 660 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 CTPS1P17812 591 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 CSRP1P21291 193 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 TNNT3P45378 269 aaPredicted RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 THOP1P52888 689 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 EIF3EP60228 445 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 RPL26P61254 145 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 IL9RQ01113 521 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 LRRC14Q15048 493 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 ACOX1Q15067 660 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 RPS6KA1Q15418 735 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 PPM1JQ5JR12 505 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 PRAMEF14Q5SWL7 426 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 AADACL2Q6P093 401 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 LIPIQ6XZB0 460 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 TTC13Q8NBP0 860 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 DEFB124Q8NES8 71 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 LPCAT1Q8NF37 534 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 SETD7Q8WTS6 366 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 HTR3CQ8WXA8 447 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 KLF6Q99612 283 aaPredicted RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 SLC25A51Q9H1U9 297 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 GLOD4Q9HC38 313 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 PCDH9Q9HC56 1237 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 DNPEPQ9ULA0 475 aa18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 RPL26L1Q9UNX3 145 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-216ENST00000552301 ZNF189O75820 626 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 STK10O94804 968 aaKnown RBP18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 PDHA1P08559 390 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 CD59P13987 128 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 IGFALSP35858 605 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 SKOR1P84550 965 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 IRF4Q15306 451 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 DENND2CQ68D51 928 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 PSAPL1Q6NUJ1 521 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 DARS2Q6PI48 645 aaKnown RBP18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 ERMP1Q7Z2K6 904 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 SPATS2Q86XZ4 545 aaKnown RBP18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 NAXDQ8IW45 347 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 TP53I13Q8NBR0 393 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 TRIM58Q8NG06 486 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 PIH1D2Q8WWB5 315 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 CENPTQ96BT3 561 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 SCRN2Q96FV2 425 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 BMFQ96LC9 184 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 TEKT5Q96M29 485 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms