RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ZNF202O95125 648 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 IGSF6O95976 241 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 ACVRL1P37023 503 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 PMS1P54277 932 aaKnown RBP15.38■□□□□ 0.05
CACNB3-220ENST00000551716 RNASE9P60153 205 aaKnown RBP15.38■□□□□ 0.05
CACNB3-220ENST00000551716 GRM3Q14832 879 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 OTUD1Q5VV17 481 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-220ENST00000551716 ASB18Q6ZVZ8 466 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 KDELC2Q7Z4H8 507 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 FAM129CQ86XR2 697 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 CCDC13Q8IYE1 715 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 PMEPA1Q969W9 287 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 GSDMAQ96QA5 445 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 SPRY4Q9C004 299 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 COQ6Q9Y2Z9 468 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 PCDHB3Q9Y5E6 796 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 ACTL7AQ9Y615 435 aa15.38■□□□□ 0.05
CACNB3-220ENST00000551716 TMEM202A6NGA9 273 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 TTLL8A6PVC2 850 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 KDELR3O43731 214 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 ERBB2P04626 1255 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 PCCBP05166 539 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 ITIH2P19823 946 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 GNLYP22749 145 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 OAS2P29728 719 aaKnown RBP15.37■□□□□ 0.05
CACNB3-220ENST00000551716 STIM1Q13586 685 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 RAPGEF1Q13905 1077 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 UGP2Q16851 508 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 INO80DQ53TQ3 878 aaPredicted RBP15.37■□□□□ 0.05
CACNB3-220ENST00000551716 ATXN7L2Q5T6C5 722 aaPredicted RBP15.37■□□□□ 0.05
CACNB3-220ENST00000551716 TMEM71Q6P5X7 295 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 CEACAM20Q6UY09 585 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 ZDHHC1Q8WTX9 485 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 STARD8Q92502 1023 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 GSDMCQ9BYG8 508 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 CYP4F12Q9HCS2 524 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 FGF22Q9HCT0 170 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 ACP6Q9NPH0 428 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 KCNMB2Q9Y691 235 aa15.37■□□□□ 0.05
CACNB3-220ENST00000551716 CACNA1DQ01668 2161 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 DOPEY1Q5JWR5 2465 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 LOC101059948A0A1B0GTJ6 334 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 PSMA7O14818 248 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 BUB1O43683 1085 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 PRKCGP05129 697 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 FGF1P05230 155 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 THRAP10827 490 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 CCNB1P14635 433 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 RHOQP17081 205 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 ELAVL4P26378 380 aaKnown RBP15.36■□□□□ 0.05
CACNB3-220ENST00000551716 KRT9P35527 623 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 SCNN1AP37088 669 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 USP8P40818 1118 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 LIG3P49916 1009 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 PTK2Q05397 1052 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 ILF3Q12906 894 aaKnown RBP eCLIP15.36■□□□□ 0.05
CACNB3-220ENST00000551716 ARTNQ5T4W7 220 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 ANKS6Q68DC2 871 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 C16orf46Q6P387 395 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 FOXR2Q6PJQ5 311 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 TICAM1Q8IUC6 712 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 SFTPA2Q8IWL1 248 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 FUBP1Q96AE4 644 aaKnown RBP15.36■□□□□ 0.05
CACNB3-220ENST00000551716 RTP4Q96DX8 246 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 DHTKD1Q96HY7 919 aaPredicted RBP15.36■□□□□ 0.05
CACNB3-220ENST00000551716 TBCBQ99426 244 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 PCDH12Q9NPG4 1184 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 MRPL40Q9NQ50 206 aaKnown RBP15.36■□□□□ 0.05
CACNB3-220ENST00000551716 SPATS2LQ9NUQ6 558 aaKnown RBP15.36■□□□□ 0.05
CACNB3-220ENST00000551716 OCIAD1Q9NX40 245 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 MOSPD1Q9UJG1 213 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 SRPK3Q9UPE1 567 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 DAAM1Q9Y4D1 1078 aa15.36■□□□□ 0.05
CACNB3-220ENST00000551716 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 RAMP2O60895 175 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 SMC2O95347 1197 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 ECEL1O95672 775 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 GNA14O95837 355 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 TFE3P19532 575 aaPredicted RBP15.35■□□□□ 0.05
CACNB3-220ENST00000551716 TRIM23P36406 574 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 PPP1R2P41236 205 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 UQCRFS1P47985 274 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 MAZP56270 477 aaKnown RBP15.35■□□□□ 0.05
CACNB3-220ENST00000551716 GPLD1P80108 840 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 MC2RQ01718 297 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 NRG1Q02297 640 aaPredicted RBP15.35■□□□□ 0.05
CACNB3-220ENST00000551716 CFAP58Q5T655 872 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 KCTD16Q68DU8 428 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 BRAT1Q6PJG6 821 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 NYAP1Q6ZVC0 841 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 MAMDC2Q7Z304 686 aaPredicted RBP15.35■□□□□ 0.05
CACNB3-220ENST00000551716 PASD1Q8IV76 773 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 FAM114A1Q8IWE2 563 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 ESX1Q8N693 406 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 CPT1CQ8TCG5 803 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 ZNF641Q96N77 438 aaPredicted RBP15.35■□□□□ 0.05
CACNB3-220ENST00000551716 PHF12Q96QT6 1004 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 SUV39H2Q9H5I1 410 aa15.35■□□□□ 0.05
CACNB3-220ENST00000551716 FBXO8Q9NRD0 319 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms