RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 MAXP61244 160 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 RPS14P62263 151 aaKnown RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 SNRPD1P62314 119 aaKnown RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 RACK1P63244 317 aaKnown RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 DR1Q01658 176 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 BNC1Q01954 994 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 P3H1Q32P28 736 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 TEX44Q53QW1 395 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 ANKRD20A2Q5SQ80 823 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 FAM182AQ5T1J6 154 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 ANKRD20A1Q5TYW2 823 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 ANKRD20A3Q5VUR7 823 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 ITPRIPL1Q6GPH6 555 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 ARHGEF18Q6ZSZ5 1173 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 Q6ZVU0 165 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 TMPRSS12Q86WS5 348 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 ZNF567Q8N184 647 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 RYBPQ8N488 228 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 TEX26Q8N6G2 289 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 ZNF366Q8N895 744 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 TSEN2Q8NCE0 465 aaKnown RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 CCDC110Q8TBZ0 833 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 GANCQ8TET4 914 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 BIRC7Q96CA5 298 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 GDAP1L1Q96MZ0 367 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 SPATA13Q96N96 652 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 AGAP3Q96P47 875 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 PSKH2Q96QS6 385 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 POLR1EQ9GZS1 481 aaKnown RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 TNKS2Q9H2K2 1166 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 C6orf106Q9H6K1 298 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 L2HGDHQ9H9P8 463 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 USP29Q9HBJ7 922 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 PRSS16Q9NQE7 514 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 FTSJ1Q9UET6 329 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 PCYOX1Q9UHG3 505 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 AMACRQ9UHK6 382 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 FEZ2Q9UHY8 353 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 TRHDEQ9UKU6 1024 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 PCDHGA1Q9Y5H4 931 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 SNX11Q9Y5W9 270 aa12.19□□□□□ -0.46
HDAC7-226ENST00000547259 GCN1Q92616 2671 aaKnown RBP12.19□□□□□ -0.46
HDAC7-226ENST00000547259 EDDM13A0A1B0GTR0 161 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 TARSL2A2RTX5 802 aaKnown RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 TRABD2BA6NFA1 517 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 C5orf60A6NFR6 353 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 VILLO15195 856 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 GSRP00390 522 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 KRT14P02533 472 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 ATXN1LP0C7T5 689 aaKnown RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 ETS1P14921 441 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 NFKB1P19838 968 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 HNF1BP35680 557 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 DHX34Q14147 1143 aaKnown RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 SMAD1Q15797 465 aaKnown RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 COL28A1Q2UY09 1125 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 HNRNPA1L2Q32P51 320 aaKnown RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 ATXN7L2Q5T6C5 722 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 KIAA0895LQ68EN5 471 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 C8orf74Q6P047 294 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 C19orf48Q6RUI8 117 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 PID1Q7Z2X4 250 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 CACUL1Q86Y37 369 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 PGBD5Q8N414 524 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 MDM1Q8TC05 714 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 ISG20Q96AZ6 181 aaKnown RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 RTP4Q96DX8 246 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 TEKT5Q96M29 485 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 MGME1Q9BQP7 344 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 RSPH9Q9H1X1 276 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 GBA3Q9H227 469 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 MTG2Q9H4K7 406 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 PCDH9Q9HC56 1237 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 RRAGDQ9NQL2 400 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 TOR4AQ9NXH8 423 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 FZD4Q9ULV1 537 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 ATP8A1Q9Y2Q0 1164 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 CELSR3Q9NYQ7 3312 aa12.18□□□□□ -0.46
HDAC7-226ENST00000547259 HELZ2Q9BYK8 2649 aaKnown RBP12.18□□□□□ -0.46
HDAC7-226ENST00000547259 COL5A1P20908 1838 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 F5H423 210 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 MUSKO15146 869 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 TTI1O43156 1089 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 MAGEC1O60732 1142 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 GCATO75600 419 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 ZSCAN5DPP0CG00 497 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 NUDT1P36639 197 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 CTSKP43235 329 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 RGRP47804 291 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 VPS41P49754 854 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 CCNHP51946 323 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 TRIP13Q15645 432 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 CARD16Q5EG05 197 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 PRUNE1Q86TP1 453 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 JAMLQ86YT9 394 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 OXR1Q8N573 874 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms