RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 AFG1LQ8WV93 481 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 RASSF5Q8WWW0 418 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ANKS1AQ92625 1134 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 PRCCQ92733 491 aaPredicted RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 RMDN1Q96DB5 314 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 VMP1Q96GC9 406 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 FAM167AQ96KS9 214 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 TCEANC2Q96MN5 208 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 SLC46A1Q96NT5 459 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MAP3K14Q99558 947 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 PYM1Q9BRP8 204 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 CD209Q9NNX6 404 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 NLRC4Q9NPP4 1024 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 CNGB3Q9NQW8 809 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 SAR1AQ9NR31 198 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ABCF3Q9NUQ8 709 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 LIMA1Q9UHB6 759 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ASAP1Q9ULH1 1129 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 TMCC3Q9ULS5 477 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 GUCA1BQ9UMX6 200 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 FAF1Q9UNN5 650 aaPredicted RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 RABGAP1Q9Y3P9 1069 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 TRIM17Q9Y577 477 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 CLIC4Q9Y696 253 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 EID1Q9Y6B2 187 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 A0A1B0GUL6 1792 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 LOC105371267A0A1B0GV96 52 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 F8W8V4 182 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF701M0R085 212 aaPredicted RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 XPO1O14980 1071 aaKnown RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 CSDE1O75534 798 aaKnown RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 TOMM70O94826 608 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 NXPH3O95157 252 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 BMP15O95972 392 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 AFPP02771 609 aaKnown RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 JUPP14923 745 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 CTRB1P17538 263 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 CD9P21926 228 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 CRABP2P29373 138 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 GNL1P36915 607 aaPredicted RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 HSD17B3P37058 310 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 IL15P40933 162 aaPredicted RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 CETN2P41208 172 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 GSSP48637 474 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 HSD17B4P51659 736 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF134P52741 427 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 ATXN1P54253 815 aaKnown RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 B2MP61769 119 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 NIPAL4Q0D2K0 466 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 GALNT1Q10472 559 aaPredicted RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 ASPHQ12797 758 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 STK4Q13043 487 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 HLTFQ14527 1009 aaKnown RBP eCLIP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 PLEKHG6Q3KR16 790 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 METTL21CQ5VZV1 264 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 SUMO4Q6EEV6 95 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 CTRB2Q6GPI1 263 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 KLHL35Q6PF15 583 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 SHC4Q6S5L8 630 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 LAYNQ6UX15 382 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 FRA10AC1Q70Z53 315 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 RIBC1Q8N443 379 aaPredicted RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 ATP6V0D2Q8N8Y2 350 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 BBOF1Q8ND07 529 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 NCOA7Q8NI08 942 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF398Q8TD17 642 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 UCMAQ8WVF2 138 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 SMG7Q92540 1137 aaKnown RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 WASF1Q92558 559 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 STMN2Q93045 179 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 BORCS5Q969J3 196 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 NEUROD6Q96NK8 337 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 PSKH2Q96QS6 385 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 MRPS26Q9BYN8 205 aaKnown RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 SHCBP1LQ9BZQ2 653 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 DIABLOQ9NR28 239 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 INTS9Q9NV88 658 aaKnown RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 PAG1Q9NWQ8 432 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 NKX1-2Q9UD57 310 aaPredicted RBP5.98□□□□□ -1.45
XRCC4-206ENST00000542685 TRIM10Q9UDY6 481 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 DNAJC12Q9UKB3 198 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 STX8Q9UNK0 236 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 B3GNT3Q9Y2A9 372 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 STK38LQ9Y2H1 464 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 IFT52Q9Y366 437 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 HEY1Q9Y5J3 304 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 ATP8B3O60423 1300 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 PCDH11XQ9BZA7 1347 aa5.98□□□□□ -1.45
XRCC4-206ENST00000542685 MYH11P35749 1972 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 FUOMA2VDF0 154 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 WDR91A4D1P6 747 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 TARM1B6A8C7 271 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CCDC188H7C350 402 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 SH2B2O14492 632 aaPredicted RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 RNF113AO15541 343 aaKnown RBP5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ZWINTO95229 277 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CELA2AP08217 269 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 ALOX5P09917 674 aa5.97□□□□□ -1.45
XRCC4-206ENST00000542685 CHRNB1P11230 501 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms