RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 GPRIN3Q6ZVF9 776 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PLEKHM3Q6ZWE6 761 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 HTR3DQ70Z44 454 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 FAM214BQ7L5A3 538 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CD163Q86VB7 1156 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SRRM1Q8IYB3 904 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 RNF113BQ8IZP6 322 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TAGAPQ8N103 731 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 OR8H2Q8N162 312 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 MB21D1Q8N884 522 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 FAM71DQ8N9W8 422 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 DTWD2Q8NBA8 298 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TMIEQ8NEW7 156 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 LPCAT1Q8NF37 534 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 OR5H6Q8NGV6 325 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 OR52N1Q8NH53 320 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SLC30A5Q8TAD4 765 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PIWIL2Q8TC59 973 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 UTP15Q8TED0 518 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PSPC1Q8WXF1 523 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PTP4A1Q93096 173 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 KISS1RQ969F8 398 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 C12orf43Q96C57 262 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SLC25A36Q96CQ1 311 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 DCAF5Q96JK2 942 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 MRGPRX3Q96LB0 322 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TEKT5Q96M29 485 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CCDC140Q96MF4 163 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 QKIQ96PU8 341 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 WRNIP1Q96S55 665 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ZPBPQ9BS86 351 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 MCMBPQ9BTE3 642 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 AP1M1Q9BXS5 423 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SLC2A11Q9BYW1 496 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF700Q9H0M5 742 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ADAMTS10Q9H324 1103 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TRIT1Q9H3H1 467 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 FAM96AQ9H5X1 160 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 STN1Q9H668 368 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 XKR8Q9H6D3 395 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 NARFLQ9H6Q4 476 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 LY9Q9HBG7 655 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TM9SF3Q9HD45 589 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 RPRD1BQ9NQG5 326 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 EXD2Q9NVH0 621 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 POLR3BQ9NW08 1133 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 UCKL1Q9NWZ5 548 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 MCM9Q9NXL9 1143 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ING3Q9NXR8 418 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 MAT2BQ9NZL9 334 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF624Q9P2J8 865 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CGGBP1Q9UFW8 167 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ENPP5Q9UJA9 477 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TINAGQ9UJW2 476 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ACSL5Q9ULC5 683 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PSMD13Q9UNM6 376 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 GTF2A1LQ9UNN4 478 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ENTPD4Q9Y227 616 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SIK3Q9Y2K2 1263 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 RBMX2Q9Y388 322 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SF3B6Q9Y3B4 125 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 TRAF6Q9Y4K3 522 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 AFG3L2Q9Y4W6 797 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 PCDHGA8Q9Y5G5 932 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 GMPPBQ9Y5P6 360 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 RBM8AQ9Y5S9 174 aaKnown RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 CLUHO75153 1309 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 ZMYM2Q9UBW7 1377 aa4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SIPA1L3O60292 1781 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-219ENST00000542112 SLIT3O75094 1523 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 LMO7Q8WWI1 1683 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TTC26A0AVF1 554 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PRSS47A8MTI9 375 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 E9PAM4 449 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 H3BNH8 94 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 H3BUI4 141 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NDUFS8O00217 210 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 CACNB4O00305 520 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ABCD4O14678 606 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TNPO2O14787 897 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PLD2O14939 933 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TFECO14948 347 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ZBTB5O15062 677 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SIGLEC6O43699 453 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 FAM189A1O60320 539 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GAS7O60861 476 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NDUFS2O75306 463 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 LRRN2O75325 713 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 BCAS1O75363 584 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 KATNA1O75449 491 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 RFPL3O75679 317 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PDE9AO76083 593 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ALDH1A2O94788 518 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 RHOBTB1O94844 696 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SOX30O94993 753 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TRIM16O95361 564 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NADKO95544 446 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NDST3O95803 873 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 CRYABP02511 175 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms