RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 OSBPL8Q9BZF1 889 aa14.34□□□□□ -0.11
LTBR-209ENST00000541102 DNAJC28Q9NX36 388 aa14.34□□□□□ -0.11
LTBR-209ENST00000541102 SEPT3Q9UH03 358 aa14.34□□□□□ -0.11
LTBR-209ENST00000541102 CACNA1BQ00975 2339 aa14.33□□□□□ -0.11
LTBR-209ENST00000541102 MUSKO15146 869 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 TM7SF2O76062 418 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 PROS1P07225 676 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 SERPINA4P29622 427 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 CXCR5P32302 372 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 PTPN7P35236 360 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 GARSP41250 739 aaKnown RBP14.33□□□□□ -0.12
LTBR-209ENST00000541102 CSNK1DP48730 415 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 COPS2P61201 443 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 BCL2L1Q07817 233 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 RPS6KA1Q15418 735 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 PPP2R5EQ16537 467 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 UGP2Q16851 508 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 TMCO4Q5TGY1 634 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 ERAP2Q6P179 960 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 KYAT3Q6YP21 454 aaKnown RBP14.33□□□□□ -0.12
LTBR-209ENST00000541102 BBS12Q6ZW61 710 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 KANSL1Q7Z3B3 1105 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 DCP2Q8IU60 420 aaKnown RBP14.33□□□□□ -0.12
LTBR-209ENST00000541102 SLC22A18ASQ8N1D0 253 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 SLC25A45Q8N413 288 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 FAM174AQ8TBP5 190 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.33□□□□□ -0.12
LTBR-209ENST00000541102 HCAR2Q8TDS4 363 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 ASB12Q8WXK4 309 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 OLFM3Q96PB7 478 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 LENG8Q96PV6 779 aaPredicted RBP14.33□□□□□ -0.12
LTBR-209ENST00000541102 TUBGCP5Q96RT8 1024 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 ATP13A3Q9H7F0 1226 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 C10orf88Q9H8K7 445 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 PCDH12Q9NPG4 1184 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 UCKL1Q9NWZ5 548 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 COQ6Q9Y2Z9 468 aa14.33□□□□□ -0.12
LTBR-209ENST00000541102 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.12
LTBR-209ENST00000541102 GOLGA4Q13439 2230 aaKnown RBP14.33□□□□□ -0.12
LTBR-209ENST00000541102 IGF2RP11717 2491 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 FFAR2O15552 330 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 ATP1A1P05023 1023 aaKnown RBP14.32□□□□□ -0.12
LTBR-209ENST00000541102 SERPINB6P35237 376 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 RABIFP47224 123 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 RENBPP51606 427 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 SUOXP51687 545 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 NSUN2Q08J23 767 aaKnown RBP eCLIP14.32□□□□□ -0.12
LTBR-209ENST00000541102 ELP6Q0PNE2 266 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 PDE1CQ14123 709 aaPredicted RBP14.32□□□□□ -0.12
LTBR-209ENST00000541102 FZD2Q14332 565 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 ZNF235Q14590 738 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 TMEM52BQ4KMG9 183 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 BRAT1Q6PJG6 821 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 DHRS13Q6UX07 377 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 ZSWIM9Q86XI8 627 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 MARCH9Q86YJ5 346 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 PGBD5Q8N414 524 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 ATPAF2Q8N5M1 289 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 NSMCE1Q8WV22 266 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 GATA6Q92908 595 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 CENPTQ96BT3 561 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 ZNF599Q96NL3 588 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 PSKH2Q96QS6 385 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 C1QTNF7Q9BXJ2 289 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 MBNL1Q9NR56 388 aaKnown RBP14.32□□□□□ -0.12
LTBR-209ENST00000541102 KCND1Q9NSA2 647 aa14.32□□□□□ -0.12
LTBR-209ENST00000541102 R3HDM2Q9Y2K5 976 aaKnown RBP14.32□□□□□ -0.12
LTBR-209ENST00000541102 ARID1BQ8NFD5 2236 aaPredicted RBP14.31□□□□□ -0.12
LTBR-209ENST00000541102 TSPAN11A1L157 253 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 FAM221BA6H8Z2 402 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 TRIM38O00635 465 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 RIOK3O14730 519 aaKnown RBP14.31□□□□□ -0.12
LTBR-209ENST00000541102 SIGLEC6O43699 453 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
LTBR-209ENST00000541102 PIAS2O75928 621 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 DGKAP23743 735 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 THOP1P52888 689 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 KLF1Q13351 362 aaPredicted RBP14.31□□□□□ -0.12
LTBR-209ENST00000541102 TFDP2Q14188 446 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 TPRG1LQ5T0D9 272 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 DENND6BQ8NEG7 585 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 TSGA13Q96PP4 275 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 TMEM121BQ9BXQ6 578 aaPredicted RBP14.31□□□□□ -0.12
LTBR-209ENST00000541102 ATP8A1Q9Y2Q0 1164 aa14.31□□□□□ -0.12
LTBR-209ENST00000541102 SPTY2D1-AS1A0A0U1RR47 76 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 FAM149AA5PLN7 773 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 A8MX80 341 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 KCNK1O00180 336 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 KIF5CO60282 957 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 DKK1O94907 266 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 C6P13671 934 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 ZFXP17010 805 aaPredicted RBP14.3□□□□□ -0.12
LTBR-209ENST00000541102 TGM2P21980 687 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 IGFALSP35858 605 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 LIG3P49916 1009 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 MAXP61244 160 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 AP1S1P61966 158 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 IHHQ14623 411 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 IRF4Q15306 451 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 HS1BP3Q53T59 392 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms