RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 HEATR9A2RTY3 570 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 AP1G1O43747 822 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 GPC4O75487 556 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 CLPTM1O96005 669 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PIRTP0C851 137 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 THPOP40225 353 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 MLLT6P55198 1093 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 TRIM25Q14258 630 aaKnown RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 MGAT5BQ3V5L5 792 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 TIGD7Q6NT04 549 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 RBM44Q6ZP01 1051 aaKnown RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 ADCY4Q8NFM4 1077 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 LPGAT1Q92604 370 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PTERQ96BW5 349 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 ASB9Q96DX5 294 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 IMP4Q96G21 291 aaKnown RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 UBXN10Q96LJ8 280 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PRICKLE1Q96MT3 831 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 SLC25A51Q9H1U9 297 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 TBC1D13Q9NVG8 400 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 RAB26Q9ULW5 256 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 VWA7Q9Y334 891 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 TRAF6Q9Y4K3 522 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 TDRD15B5MCY1 1934 aaKnown RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 C7orf72A4D263 438 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 SIX3O95343 332 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 CYP11A1P05108 521 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 DNAJB1P25685 340 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 GRK4P32298 578 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 USP46P62068 366 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 YBX1P67809 324 aaKnown RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 SLC5A9Q2M3M2 681 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 NADK2Q4G0N4 442 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 FBXO48Q5FWF7 155 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 AMIGO2Q86SJ2 522 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 EME1Q96AY2 570 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 SLCO4A1Q96BD0 722 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 OCEL1Q9H607 264 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 IL1RL2Q9HB29 575 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 MYO16Q9Y6X6 1858 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 M0QZQ0 153 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 VILLO15195 856 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PRSS56P0CW18 603 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF26P17031 533 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 TSPY1Q01534 308 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PSMD5Q16401 504 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 SIRPB2Q5JXA9 342 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 ISCA2Q86U28 154 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 PGBD5Q8N414 524 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 ADAM2Q99965 735 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 COQ10BQ9H8M1 238 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 UXTQ9UBK9 157 aaPredicted RBP12.01□□□□□ -0.49
CPNE8-203ENST00000538596 AP4S1Q9Y587 144 aa12.01□□□□□ -0.49
CPNE8-203ENST00000538596 CCDC160A6NGH7 325 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 S1PR4O95977 384 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 HMBSP08397 361 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 ALDOCP09972 364 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 KPNA2P52292 529 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 RPL26P61254 145 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 SQLEQ14534 574 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 LARP7Q4G0J3 582 aaKnown RBP eCLIP12□□□□□ -0.49
CPNE8-203ENST00000538596 MARC1Q5VT66 337 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 KLC3Q6P597 504 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 KIAA0408Q6ZU52 694 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 MRPL10Q7Z7H8 261 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 SCML4Q8N228 414 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 DLG3Q92796 817 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 DNAJC1Q96KC8 554 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 TBATAQ96M53 351 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 SLC29A1Q99808 456 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 UNC93B1Q9H1C4 597 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 Q9H521 79 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 EML4Q9HC35 981 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 ATP13A1Q9HD20 1204 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 BCAP29Q9UHQ4 241 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 DSEQ9UL01 958 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 SNX13Q9Y5W8 968 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 ARL5AQ9Y689 179 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 MRASO14807 208 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 TRIM24O15164 1050 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 SOAT2O75908 522 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 SNRPB2P08579 225 aaKnown RBP12□□□□□ -0.49
CPNE8-203ENST00000538596 CLCN5P51795 746 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 FOXA1P55317 472 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 PRAMEP78395 509 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 STX5Q13190 355 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 LSAMPQ13449 338 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 ACAP2Q15057 778 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 MTX3Q5HYI7 312 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 ARMC3Q5W041 872 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 CST9Q5W186 159 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 MIB1Q86YT6 1006 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 FUNDC1Q8IVP5 155 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 THEM5Q8N1Q8 247 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 TTC9BQ8N6N2 239 aa12□□□□□ -0.49
CPNE8-203ENST00000538596 GRIN3AQ8TCU5 1115 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms