RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 hCG_1818297A0A087WSY0 165 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 C5orf60A6NFR6 353 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 GOLGA6L10A6NI86 522 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 SOWAHDA6NJG2 315 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 OR5K4A6NMS3 321 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 A6NNZ2 444 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PDLIM1O00151 329 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PIK3R2O00459 728 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 DCLK1O15075 740 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 INSIG1O15503 277 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TRIM16O95361 564 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TTC4O95801 387 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 RPN2P04844 631 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PNMA6AP0CW24 399 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 MLNP12872 115 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CCNB1P14635 433 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TSHRP16473 764 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 ITGALP20701 1170 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 SP100P23497 879 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 VIPR1P32241 457 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 S100A5P33763 92 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 THOP1P52888 689 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 ETF1P62495 437 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 RPS24P62847 133 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 RACK1P63244 317 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 SLC25A11Q02978 314 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 AP1B1Q10567 949 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 DPYSL3Q14195 570 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NOMO1Q15155 1222 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PPP1R7Q15435 360 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TMEM52BQ4KMG9 183 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PID1Q7Z2X4 250 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NLRP14Q86W24 1093 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 HORMAD1Q86X24 394 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 LRRC6Q86X45 466 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 SLC13A5Q86YT5 568 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 RGL4Q8IZJ4 473 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NAT16Q8N8M0 369 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PPHLN1Q8NEY8 458 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 ADAM32Q8TC27 787 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 DCUN1D1Q96GG9 259 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 MYO19Q96H55 970 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 FAM84AQ96KN4 292 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 SPATA13Q96N96 652 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 FCRL5Q96RD9 977 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CCDC77Q9BR77 488 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 LRFN3Q9BTN0 628 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 LINC00597Q9H2U6 94 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 GDF3Q9NR23 364 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 OSER1Q9NX31 292 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 FBXL12Q9NXK8 326 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TUBA8Q9NY65 449 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 GTSE1Q9NYZ3 720 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 AJAP1Q9UKB5 411 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 PLXNA4Q9HCM2 1894 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 A6NCN8 305 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF839A8K0R7 811 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 IFRD1O00458 451 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TNFRSF10CO14798 259 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TM7SF2O76062 418 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TMCC1O94876 653 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 RECKO95980 971 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 EGFP01133 1207 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 KLKB1P03952 638 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 ITGAVP06756 1048 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 C1SP09871 688 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NDUFS1P28331 727 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 MZF1P28698 734 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 HPDP32754 393 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NBL1P41271 181 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 RPL7AP62424 266 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TUBA1BP68363 451 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 ROR2Q01974 943 aaKnown RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NAB1Q13506 487 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TAZQ16635 292 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 UGP2Q16851 508 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 BBS9Q3SYG4 887 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 GPR33Q49SQ1 333 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TEX44Q53QW1 395 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 C2orf27AQ580R0 203 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 STXBP5Q5T5C0 1151 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 LGSNQ5TDP6 509 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 MEI1Q5TIA1 1274 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 AFMIDQ63HM1 303 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 RFWD3Q6PCD5 774 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 KLHL35Q6PF15 583 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CERS6Q6ZMG9 384 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TUBA1AQ71U36 451 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TFAP2DQ7Z6R9 452 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TEX26Q8N6G2 289 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 NETO1Q8TDF5 533 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CLEC4CQ8WTT0 213 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 HMGB4Q8WW32 186 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 CDKL2Q92772 493 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 KHSRPQ92945 711 aaKnown RBP eCLIP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 HES6Q96HZ4 224 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 TTC25Q96NG3 672 aa3.6□□□□□ -1.83
PTPN22-211ENST00000538253 LENG8Q96PV6 779 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-211ENST00000538253 SLC22A12Q96S37 553 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms