RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 PCDH12Q9NPG4 1184 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 MYO1AQ9UBC5 1043 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 SEPT3Q9UH03 358 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 KLF15Q9UIH9 416 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 ATP8A1Q9Y2Q0 1164 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 U3KQA8 63 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 ZFC3H1O60293 1989 aaKnown RBP10.88□□□□□ -0.67
CCDC60-202ENST00000535685 LAMA5O15230 3695 aa10.88□□□□□ -0.67
CCDC60-202ENST00000535685 CELSR3Q9NYQ7 3312 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 A0A087WV48 116 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 A0A087X0T9 212 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 FAM149AA5PLN7 773 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 AQP9O43315 295 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 HTRA2O43464 458 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 PIGNO95427 931 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 PEX11BO96011 259 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 GYPCP04921 128 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 HOXC4P09017 264 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 FAM228BP0C875 321 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 RARAP10276 462 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 ITIH2P19823 946 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 CR2P20023 1033 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 XPAP23025 273 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 SERPINA4P29622 427 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 MMP12P39900 470 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 RGRP47804 291 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 THOP1P52888 689 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 POLR2LP62875 67 aaKnown RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 DAB2P98082 770 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 SLC25A11Q02978 314 aaKnown RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 CYP4F3Q08477 520 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 TARDBPQ13148 414 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 LRRC14Q15048 493 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 WSCD2Q2TBF2 565 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 SKOR2Q2VWA4 1001 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 CCDC157Q569K6 752 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 ERAP2Q6P179 960 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 ZSWIM9Q86XI8 627 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 CAMK1DQ8IU85 385 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 NETO2Q8NC67 525 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 EXOC2Q96KP1 924 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 CSPG4P5Q96PW8 444 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 CINPQ9BW66 212 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 THAP2Q9H0W7 228 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 MBNL1Q9NR56 388 aaKnown RBP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 SPASTQ9UBP0 616 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 LCMT1Q9UIC8 334 aa10.87□□□□□ -0.67
CCDC60-202ENST00000535685 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC60-202ENST00000535685 EME2A4GXA9 379 aaPredicted RBP10.86□□□□□ -0.67
CCDC60-202ENST00000535685 LMO7DNF2Z398 122 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 MYO1FO00160 1098 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 DFFAO00273 331 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 MUSKO15146 869 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 FFAR2O15552 330 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 OPA1O60313 960 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 SOCS5O75159 536 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 TPM3P06753 285 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 C6P13671 934 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 TCF4P15884 667 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 AMPD1P23109 780 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 IL4RP24394 825 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 SERPINB6P35237 376 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 EIF4A3P38919 411 aaKnown RBP10.86□□□□□ -0.67
CCDC60-202ENST00000535685 BLKP51451 505 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 ARSEP51690 589 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 BCL2L1Q07817 233 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 RALGDSQ12967 914 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 MTM1Q13496 603 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 LBRQ14739 615 aaKnown RBP10.86□□□□□ -0.67
CCDC60-202ENST00000535685 IRF4Q15306 451 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 ZSCAN23Q3MJ62 389 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 ZNF542PQ5EBM4 170 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 LRRC73Q5JTD7 316 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 LVRNQ6Q4G3 990 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 TMCO3Q6UWJ1 677 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 ARHGAP36Q6ZRI8 547 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 DPPA4Q7L190 304 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 MARCH9Q86YJ5 346 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 PHACTR4Q8IZ21 702 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 ATL2Q8NHH9 583 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 TPCN2Q8NHX9 752 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 FATE1Q969F0 183 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 GRAMD1AQ96CP6 724 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 MGME1Q9BQP7 344 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.86□□□□□ -0.67
CCDC60-202ENST00000535685 NUP85Q9BW27 656 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 BOCQ9BWV1 1114 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 PCDH18Q9HCL0 1135 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 ETNK2Q9NVF9 386 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 KCTD5Q9NXV2 234 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 IFNKQ9P0W0 207 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 UVRAGQ9P2Y5 699 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 CLCA2Q9UQC9 943 aa10.86□□□□□ -0.67
CCDC60-202ENST00000535685 SSU72P8A0A1W2PR75 194 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 MAFKO60675 156 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 S1PR4O95977 384 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 MT-CO3P00414 261 aa10.85□□□□□ -0.67
CCDC60-202ENST00000535685 TRIM23P36406 574 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms