RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 LAMTOR5O43504 91 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 NFKBIAP25963 317 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 CCDC15Q0P6D6 951 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 SFSWAPQ12872 951 aaKnown RBP17.73■□□□□ 0.43
CTSB-222ENST00000531551 POU6F1Q14863 301 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 CCDC25Q86WR0 208 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 CAMKK1Q8N5S9 505 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 ARNT2Q9HBZ2 717 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 B4GALT6Q9UBX8 382 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 CKAP5Q14008 2032 aa17.73■□□□□ 0.43
CTSB-222ENST00000531551 FAM47DPA6NHR8 397 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 MGAT1P26572 445 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 TPMTP51580 245 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 ARL4CP56559 192 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 CRADDP78560 199 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 CUL1Q13616 776 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 SEPT6Q14141 434 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 HIF1AQ16665 826 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 BBS9Q3SYG4 887 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 FNBP1LQ5T0N5 605 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 PIP5KL1Q5T9C9 394 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 AGBL4Q5VU57 503 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 CASC4Q6P4E1 433 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 PDIK1LQ8N165 341 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 OR14C36Q8NHC7 312 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 SCRN2Q96FV2 425 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 BFARQ9NZS9 450 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 EBF1Q9UH73 591 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 GGT7Q9UJ14 662 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 CYP8B1Q9UNU6 501 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 SPO11Q9Y5K1 396 aa17.72■□□□□ 0.43
CTSB-222ENST00000531551 PRR23AA6NEV1 266 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 NPIPB15A6NHN6 443 aaPredicted RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 GOLGA8CPA6NN73 597 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 AP3B1O00203 1094 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 BANF1O75531 89 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 CYP2A6P11509 494 aaPredicted RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 CCDC38Q502W7 563 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 HP1BP3Q5SSJ5 553 aaPredicted RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 GLT6D1Q7Z4J2 308 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 BMP8AQ7Z5Y6 402 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 KBTBD6Q86V97 674 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 GSPT2Q8IYD1 628 aaKnown RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 ZDHHC18Q9NUE0 388 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 C1orf232A0A0U1RR37 186 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 CCDC78A2IDD5 438 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 CAPN8A6NHC0 703 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 K7ESF4 209 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 MLNP12872 115 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 DHX9Q08211 1270 aaKnown RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 ARHGEF7Q14155 803 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 ELF2Q15723 593 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 USP30Q70CQ3 517 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 TSPAN33Q86UF1 283 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 RASSF3Q86WH2 238 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 C1orf210Q8IVY1 113 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 ZCCHC9Q8N567 271 aaKnown RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 GPR161Q8N6U8 529 aaKnown RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 RLN3Q8WXF3 142 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 SPOCK2Q92563 424 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 RAB7BQ96AH8 199 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 WRAP53Q9BUR4 548 aaKnown RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 FRMD8Q9BZ67 464 aaPredicted RBP17.71■□□□□ 0.43
CTSB-222ENST00000531551 GPR63Q9BZJ6 419 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 ITM2CQ9NQX7 267 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 SYBUQ9NX95 663 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 PPIL1Q9Y3C6 166 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 MAD1L1Q9Y6D9 718 aa17.71■□□□□ 0.43
CTSB-222ENST00000531551 AURKAO14965 403 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 BUD23O43709 281 aaKnown RBP17.7■□□□□ 0.42
CTSB-222ENST00000531551 PCDH8O95206 1070 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 CLDN7O95471 211 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 NPY2RP49146 381 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 ELP6Q0PNE2 266 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 PDIA2Q13087 525 aaKnown RBP17.7■□□□□ 0.42
CTSB-222ENST00000531551 MSS51Q4VC12 460 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 CRTC1Q6UUV9 634 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 CENPUQ71F23 418 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 MPP5Q8N3R9 675 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 DTWD2Q8NBA8 298 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 MCCC1Q96RQ3 725 aaPredicted RBP17.7■□□□□ 0.42
CTSB-222ENST00000531551 FMO2Q99518 471 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 BTBD1Q9H0C5 482 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 MAGEE1Q9HCI5 957 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.7■□□□□ 0.421e-10■■■■□ 19.6
CTSB-222ENST00000531551 FZD4Q9ULV1 537 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 INVSQ9Y283 1065 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 ZNF711Q9Y462 761 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 FADS3Q9Y5Q0 445 aa17.7■□□□□ 0.42
CTSB-222ENST00000531551 SDR42E2A6NKP2 422 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 ECHS1P30084 290 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 AVPR2P30518 371 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 VIPR1P32241 457 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 SUOXP51687 545 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 VSNL1P62760 191 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 CSTF1Q05048 431 aaKnown RBP17.69■□□□□ 0.42
CTSB-222ENST00000531551 DNAJC21Q5F1R6 531 aaKnown RBP17.69■□□□□ 0.42
CTSB-222ENST00000531551 LRRC66Q68CR7 880 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 MAMSTRQ6ZN01 415 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms