RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.32■□□□□ 0.2
BEST1-205ENST00000526988 PDCD7Q8N8D1 485 aaKnown RBP16.32■□□□□ 0.2
BEST1-205ENST00000526988 IL12RB2Q99665 862 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 B4GALT6Q9UBX8 382 aa16.32■□□□□ 0.2
BEST1-205ENST00000526988 HTRA2O43464 458 aaPredicted RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 KDELR1P24390 212 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 NFKBIAP25963 317 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 GBE1Q04446 702 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 CYP4F3Q08477 520 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 TRAF2Q12933 501 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 NFATC4Q14934 902 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 AGERQ15109 404 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 TCEA2Q15560 299 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 IFI16Q16666 785 aaKnown RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 RALGPS1Q5JS13 557 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 DENND2CQ68D51 928 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 TIGD7Q6NT04 549 aaPredicted RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 ZCCHC8Q6NZY4 707 aaKnown RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 RHOT2Q8IXI1 618 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 PLA2G15Q8NCC3 412 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 LRRN4Q8WUT4 740 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 RAPGEF5Q92565 580 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 TSACCQ96A04 125 aaPredicted RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 SEMA3CQ99985 751 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 RBM22Q9NW64 420 aaKnown RBP eCLIP16.31■□□□□ 0.2
BEST1-205ENST00000526988 PNMA8BQ9ULN7 279 aaPredicted RBP16.31■□□□□ 0.2
BEST1-205ENST00000526988 TTLL3Q9Y4R7 772 aa16.31■□□□□ 0.2
BEST1-205ENST00000526988 CPED1A4D0V7 1026 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 LRRD1A4D1F6 860 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 TAF4O00268 1085 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 MATN3O15232 486 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 GCATO75600 419 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 CAPNS1P04632 268 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 ANXA6P08133 673 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 TNNT1P13805 278 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 CTSEP14091 401 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 VIPR1P32241 457 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 ARHGAP25P42331 645 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 BLKP51451 505 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 INSM1Q01101 510 aaPredicted RBP16.3■□□□□ 0.2
BEST1-205ENST00000526988 MTM1Q13496 603 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 CAMK2BQ13554 666 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 CDKN3Q16667 212 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 ODF2Q5BJF6 829 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 ARMC12Q5T9G4 340 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 SARM1Q6SZW1 724 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 PROSER1Q86XN7 944 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 TEX26Q8N6G2 289 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 PQLC3Q8N755 202 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 FAM181AQ8N9Y4 354 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 CCNYQ8ND76 341 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 ATL2Q8NHH9 583 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 RFFLQ8WZ73 363 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 RNF157Q96PX1 679 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 LRRC61Q9BV99 259 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 MAK16Q9BXY0 300 aaKnown RBP16.3■□□□□ 0.2
BEST1-205ENST00000526988 ABCG4Q9H172 646 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 USP29Q9HBJ7 922 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 HAUS2Q9NVX0 235 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 SALL4Q9UJQ4 1053 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 PHTF1Q9UMS5 762 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 DOLKQ9UPQ8 538 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 RAI2Q9Y5P3 530 aa16.3■□□□□ 0.2
BEST1-205ENST00000526988 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 CACNB4O00305 520 aaPredicted RBP16.29■□□□□ 0.2
BEST1-205ENST00000526988 TPP1O14773 563 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 YY2O15391 372 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 RASGRP1O95267 797 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 PGLSO95336 258 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 KRT1P04264 644 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 CYP2A6P11509 494 aaPredicted RBP16.29■□□□□ 0.2
BEST1-205ENST00000526988 TSHRP16473 764 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 CTPS1P17812 591 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 MX2P20592 715 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 CCNCP24863 283 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 HK3P52790 923 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 SRP54P61011 504 aaKnown RBP16.29■□□□□ 0.2
BEST1-205ENST00000526988 ALG11Q2TAA5 492 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 IFI44Q8TCB0 444 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
BEST1-205ENST00000526988 MAML1Q92585 1016 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 GLMNQ92990 594 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 WDR92Q96MX6 357 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 ZNF830Q96NB3 372 aaPredicted RBP16.29■□□□□ 0.2
BEST1-205ENST00000526988 TSGA13Q96PP4 275 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 POLR1EQ9GZS1 481 aaKnown RBP16.29■□□□□ 0.2
BEST1-205ENST00000526988 NCKIPSDQ9NZQ3 722 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 KLQ9UEF7 1012 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 CLCA2Q9UQC9 943 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 HYOU1Q9Y4L1 999 aa16.29■□□□□ 0.2
BEST1-205ENST00000526988 LY6G6EA0A0G2JKS1 128 aa16.28■□□□□ 0.2
BEST1-205ENST00000526988 LMO7DNF2Z398 122 aa16.28■□□□□ 0.2
BEST1-205ENST00000526988 OPA1O60313 960 aa16.28■□□□□ 0.2
BEST1-205ENST00000526988 MTA2O94776 668 aa16.28■□□□□ 0.2
BEST1-205ENST00000526988 HEXIM1O94992 359 aaKnown RBP16.28■□□□□ 0.2
BEST1-205ENST00000526988 MT-CO3P00414 261 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms