RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CYHR1Q6ZMK1 362 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 TICAM1Q8IUC6 712 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 DCP1BQ8IZD4 617 aaKnown RBP20.47■□□□□ 0.87
SMIM3-201ENST00000526627 KLHDC9Q8NEP7 349 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 PHF21BQ96EK2 531 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 FUBP3Q96I24 572 aaKnown RBP eCLIP20.47■□□□□ 0.873e-7■■□□□ 11.7
SMIM3-201ENST00000526627 GCNAQ96QF7 691 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 FBXO44Q9H4M3 255 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 IL37Q9NZH6 218 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 UXTQ9UBK9 157 aaPredicted RBP20.47■□□□□ 0.87
SMIM3-201ENST00000526627 PRSS51A0A1B0GVH4 220 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
SMIM3-201ENST00000526627 GALNT1Q10472 559 aaPredicted RBP20.47■□□□□ 0.87
SMIM3-201ENST00000526627 PTK2BQ14289 1009 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 PDK3Q15120 406 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 THEMIS2Q5TEJ8 643 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 KLC3Q6P597 504 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 ISCA2Q86U28 154 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 PIM3Q86V86 326 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 ICA1LQ8NDH6 482 aa20.47■□□□□ 0.87
SMIM3-201ENST00000526627 SPDYE1Q8NFV5 336 aaPredicted RBP20.47■□□□□ 0.87
SMIM3-201ENST00000526627 EML4Q9HC35 981 aaKnown RBP20.47■□□□□ 0.87
SMIM3-201ENST00000526627 UTP6Q9NYH9 597 aaKnown RBP20.47■□□□□ 0.87
SMIM3-201ENST00000526627 FBP2O00757 339 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 CAPNS1P04632 268 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 GRIA2P42262 883 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 GPR158Q5T848 1215 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 RAP1GAP2Q684P5 730 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 COLGALT2Q8IYK4 626 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 FAM156AQ8NDB6 213 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 OR6P1Q8NGX9 317 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 GPR152Q8TDT2 470 aa20.46■□□□□ 0.87
SMIM3-201ENST00000526627 EME2A4GXA9 379 aaPredicted RBP20.45■□□□□ 0.87
SMIM3-201ENST00000526627 TMEM189-UBE2V1I3L0A0 370 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 PSMD8P48556 350 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 ATXN3P54252 364 aaPredicted RBP20.45■□□□□ 0.87
SMIM3-201ENST00000526627 TIAL1Q01085 375 aaKnown RBP eCLIP20.45■□□□□ 0.87
SMIM3-201ENST00000526627 LRP8Q14114 963 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 SQLEQ14534 574 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 TLR1Q15399 786 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 CIR1Q86X95 450 aaPredicted RBP20.45■□□□□ 0.87
SMIM3-201ENST00000526627 TMEM126BQ8IUX1 230 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 LINC01599Q8WXQ3 324 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 MYEOVQ96EZ4 313 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 ALG9Q9H6U8 611 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 RGS18Q9NS28 235 aa20.45■□□□□ 0.87
SMIM3-201ENST00000526627 DRGXA6NNA5 263 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 HDCP19113 662 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 IMPDH1P20839 514 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 ACVR1Q04771 509 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 ZNF549Q6P9A3 640 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 GLB1LQ6UWU2 654 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 SLC22A9Q8IVM8 553 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 ARHGAP18Q8N392 663 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 PCDH20Q8N6Y1 951 aaKnown RBP20.45■□□□□ 0.86
SMIM3-201ENST00000526627 GABPB2Q8TAK5 448 aaPredicted RBP20.45■□□□□ 0.86
SMIM3-201ENST00000526627 DLG3Q92796 817 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 PTERQ96BW5 349 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 BTN2A3PQ96KV6 586 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 PKP2Q99959 881 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 COPS7BQ9H9Q2 264 aaPredicted RBP20.45■□□□□ 0.86
SMIM3-201ENST00000526627 VWA8A3KMH1 1905 aa20.45■□□□□ 0.86
SMIM3-201ENST00000526627 FAM92AA1XBS5 289 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 TRIM38O00635 465 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 DENRO43583 198 aaKnown RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 ETFBP38117 255 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 PSME3P61289 254 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 TRIP4Q15650 581 aaPredicted RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 NFE2Q16621 373 aaPredicted RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 ATP6V0D2Q8N8Y2 350 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 ATAD1Q8NBU5 361 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 L3HYPDHQ96EM0 354 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 TBATAQ96M53 351 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 MRPL1Q9BYD6 325 aaKnown RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 TRPC7Q9HCX4 862 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 PAPOLBQ9NRJ5 636 aaKnown RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 POLR3BQ9NW08 1133 aaPredicted RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 CACNA2D2Q9NY47 1150 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 BCAP29Q9UHQ4 241 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 SARDHQ9UL12 918 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 PRG3Q9Y2Y8 225 aaPredicted RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 TRAF6Q9Y4K3 522 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 MUSKO15146 869 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 UBDO15205 165 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 AP1G1O43747 822 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 DNAJA2O60884 412 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 ACVRL1P37023 503 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 SLC26A3P40879 764 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 PRAMEP78395 509 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 IL10RBQ08334 325 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 SERINC3Q13530 473 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 FASTKQ14296 549 aaKnown RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 PTPRCAPQ14761 206 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 UNC50Q53HI1 259 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 ZNF678Q5SXM1 525 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 ST13P4Q8IZP2 240 aaPredicted RBP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 MARVELD2Q8N4S9 558 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 LRGUKQ96M69 825 aa20.44■□□□□ 0.86
SMIM3-201ENST00000526627 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMIM3-201ENST00000526627 E7ENX8 843 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms