RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZCCHC8Q6NZY4 707 aaKnown RBP18.65■□□□□ 0.58
CAPN1-203ENST00000525013 LIPIQ6XZB0 460 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 DPPA4Q7L190 304 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 HID1Q8IV36 788 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 MAP7D3Q8IWC1 876 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 FAM181AQ8N9Y4 354 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 FAM71BQ8TC56 605 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 CCDC42Q96M95 316 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 NUDCD1Q96RS6 583 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 CHP1Q99653 195 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 MGME1Q9BQP7 344 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 APOOQ9BUR5 198 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 NT5MQ9NPB1 228 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 LCMT1Q9UIC8 334 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 PNMA8BQ9ULN7 279 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-203ENST00000525013 CLCA2Q9UQC9 943 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 OR1A2Q9Y585 309 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 CFAP69A5D8W1 941 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 MFSD11O43934 449 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 MFAP3LO75121 409 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 SOCS5O75159 536 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 GCATO75600 419 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 RECQL5O94762 991 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-203ENST00000525013 MAP3K6O95382 1288 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 ANXA6P08133 673 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 TMEM253P0C7T8 217 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 CR2P20023 1033 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 HTR1BP28222 390 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 ITKQ08881 620 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 ACOX1Q15067 660 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 AGERQ15109 404 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 PDK2Q15119 407 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 TCEA2Q15560 299 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 ENPP7Q6UWV6 458 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 RD3Q7Z3Z2 195 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 LRRC49Q8IUZ0 686 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 PCDH19Q8TAB3 1148 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 TSACCQ96A04 125 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-203ENST00000525013 LRRC61Q9BV99 259 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 ABCG4Q9H172 646 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 NHEJ1Q9H9Q4 299 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-203ENST00000525013 USP29Q9HBJ7 922 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 SPTLC3Q9NUV7 552 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 RAXQ9Y2V3 346 aa18.64■□□□□ 0.57
CAPN1-203ENST00000525013 LY6G6EA0A0G2JKS1 128 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 A0A1W2PQ67 120 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 CPED1A4D0V7 1026 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 TPP1O14773 563 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 OPA1O60313 960 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 CPP00450 1065 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 CTSEP14091 401 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 TSHRP16473 764 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 GARSP41250 739 aaKnown RBP18.63■□□□□ 0.57
CAPN1-203ENST00000525013 BLKP51451 505 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 MTM1Q13496 603 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 NFATC4Q14934 902 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 PAFAH1B3Q15102 231 aaKnown RBP18.63■□□□□ 0.57
CAPN1-203ENST00000525013 CDKN3Q16667 212 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 NCBP2-AS2Q69YL0 99 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.63■□□□□ 0.57
CAPN1-203ENST00000525013 PLA2G15Q8NCC3 412 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 SLC35G2Q8TBE7 412 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 RFFLQ8WZ73 363 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 NXPE2Q96DL1 559 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 ZNF670Q9BS34 389 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 NCKIPSDQ9NZQ3 722 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 DKK4Q9UBT3 224 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 B4GALT6Q9UBX8 382 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 SALL4Q9UJQ4 1053 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 DOLKQ9UPQ8 538 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 AK5Q9Y6K8 562 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 U3KQA8 63 aa18.63■□□□□ 0.57
CAPN1-203ENST00000525013 LMO7DNF2Z398 122 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 HTRA2O43464 458 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-203ENST00000525013 RASGRP1O95267 797 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 MT-CO3P00414 261 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 NFKBIAP25963 317 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 MAN1A1P33908 653 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 HK3P52790 923 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 GALNT2Q10471 571 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 TRAF2Q12933 501 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 ALG11Q2TAA5 492 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 RALGPS1Q5JS13 557 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 DENND2CQ68D51 928 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 IFI44Q8TCB0 444 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 GLMNQ92990 594 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 WDR92Q96MX6 357 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 SEMA3CQ99985 751 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 CLPBQ9H078 707 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 KLQ9UEF7 1012 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 RALYQ9UKM9 306 aaKnown RBP18.62■□□□□ 0.57
CAPN1-203ENST00000525013 PHTF1Q9UMS5 762 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 TTLL3Q9Y4R7 772 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 LRP4O75096 1905 aa18.62■□□□□ 0.57
CAPN1-203ENST00000525013 AKR1B15C9JRZ8 316 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 CACNB4O00305 520 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 YY2O15391 372 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 GP1BAP07359 652 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 VIPR1P32241 457 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms