RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 SLC39A1Q9NY26 324 aa11.77□□□□□ -0.53
TMEM55A-202ENST00000518359 PLEKHB1Q9UF11 243 aaPredicted RBP11.77□□□□□ -0.53
TMEM55A-202ENST00000518359 OR12D3Q9UGF7 316 aa11.77□□□□□ -0.53
TMEM55A-202ENST00000518359 B3GALT1Q9Y5Z6 326 aa11.77□□□□□ -0.53
TMEM55A-202ENST00000518359 TMEM202A6NGA9 273 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 PRR19A6NJB7 356 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 B4GAT1O43505 415 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 KDELR3O43731 214 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 PRKAR1AP10644 381 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 MAN1A1P33908 653 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 STAT1P42224 750 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 GPR3P46089 330 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 LIG3P49916 1009 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 ARSDP51689 593 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 LIMK2P53671 638 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 OR1D5P58170 312 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 MC1RQ01726 317 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 NRG1Q02297 640 aaPredicted RBP11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 PEX6Q13608 980 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 UGP2Q16851 508 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 INO80DQ53TQ3 878 aaPredicted RBP11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 ARTNQ5T4W7 220 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 LEKR1Q6ZMV7 388 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 ZNF438Q7Z4V0 828 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 FMR1NBQ8N0W7 255 aaPredicted RBP11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 MSANTD4Q8NCY6 345 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 NELFBQ8WX92 580 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 DPYSL5Q9BPU6 564 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 CRACR2AQ9BSW2 395 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 ZMYND15Q9H091 742 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 TMEM168Q9H0V1 697 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 CYP4F12Q9HCS2 524 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 PCDH12Q9NPG4 1184 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 DACH1Q9UI36 760 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 MOSPD1Q9UJG1 213 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 DAAM1Q9Y4D1 1078 aa11.76□□□□□ -0.53
TMEM55A-202ENST00000518359 TEP1Q99973 2627 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 ITPR2Q14571 2701 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NKX2-8O15522 239 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 AGFG2O95081 481 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 FGFR1OPO95684 399 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 HOXC4P09017 264 aaPredicted RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 MAP4P27816 1152 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 FLT3P36888 993 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 MMP12P39900 470 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NOP2P46087 812 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 GABRB2P47870 512 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 MAZP56270 477 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 BPIFB4P59827 614 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 ILF3Q12906 894 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NR1D2Q14995 579 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 KCTD16Q68DU8 428 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 BRAT1Q6PJG6 821 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 GBP6Q6ZN66 633 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NYAP1Q6ZVC0 841 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 BNIPLQ7Z465 357 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NLRP14Q86W24 1093 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 FAM129CQ86XR2 697 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 DNAAF5Q86Y56 855 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 SFTPA2Q8IWL1 248 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NRSN1Q8IZ57 195 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NLGN4XQ8N0W4 816 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 NLGN4YQ8NFZ3 816 aaPredicted RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 OR4D9Q8NGE8 314 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 ZDHHC1Q8WTX9 485 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 PMEPA1Q969W9 287 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 FUBP1Q96AE4 644 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 TBC1D31Q96DN5 1066 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 CFAP57Q96MR6 1250 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 GSDMCQ9BYG8 508 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 WDR26Q9H7D7 661 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 MRPL40Q9NQ50 206 aaKnown RBP11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 PLCB1Q9NQ66 1216 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 IGSF5Q9NSI5 407 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 CTNND2Q9UQB3 1225 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 ATP8A1Q9Y2Q0 1164 aa11.75□□□□□ -0.53
TMEM55A-202ENST00000518359 CENPEQ02224 2701 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 SPENQ96T58 3664 aaKnown RBP11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 PRSS38A1L453 326 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 CFAP69A5D8W1 941 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 B4E171 279 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 GOLGA8SH3BPF8 625 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 MTSS1O43312 755 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 VPS4BO75351 444 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 THRAP10827 490 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 CCNB1P14635 433 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 SLC9A1P19634 815 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 CD1CP29017 333 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 TSPAN7P41732 249 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 ATP11AP98196 1134 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 DEFB109BQ30KR1 87 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 MANEALQ5VSG8 457 aa11.74□□□□□ -0.53
TMEM55A-202ENST00000518359 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms