RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PSPC1Q8WXF1 523 aaKnown RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 TRIB2Q92519 343 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 SLC41A2Q96JW4 573 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 APOLD1Q96LR9 279 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 TMEM68Q96MH6 324 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 LRFN5Q96NI6 719 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 FAM110AQ9BQ89 295 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 POLDIP3Q9BY77 421 aaKnown RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 NUF2Q9BZD4 464 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 GLIS2Q9BZE0 524 aaPredicted RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 CLK4Q9HAZ1 481 aaKnown RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 FBRSL1Q9HCM7 1045 aaKnown RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 SLC6A13Q9NSD5 602 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 TMEM51Q9NW97 253 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 NSMCE4AQ9NXX6 385 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 RNF7Q9UBF6 113 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 FBXO2Q9UK22 296 aaPredicted RBP3.14□□□□□ -1.91
SKP1-203ENST00000517625 PNMA2Q9UL42 364 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 CAPN7Q9Y6W3 813 aa3.14□□□□□ -1.91
SKP1-203ENST00000517625 A0A1B0GVM2 712 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 TMEM202A6NGA9 273 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 CD8B2A6NJW9 211 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 I6L893 689 aaPredicted RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 GTPBP1O00178 669 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 TGFB1I1O43294 461 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 HCRTR2O43614 444 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 NDUFS3O75489 264 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 DAB1O75553 588 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 RNASEH2AO75792 299 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 GAGE7O76087 117 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 EIF2S1P05198 315 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 GAGE12FP0CL80 117 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 GAGE12GP0CL81 117 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 GAGE12IP0CL82 117 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 ZNF182P17025 639 aaPredicted RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 ICAM3P32942 547 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 SHMT1P34896 483 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 RGS2P41220 211 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 PIP4K2AP48426 406 aaPredicted RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 Q0VFX4 171 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 GAGE1Q13065 139 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 GAGE4Q13068 117 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 AIMP2Q13155 320 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 GPS2Q13227 327 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 PRKG2Q13237 762 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 FGFBP1Q14512 234 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 CRYMQ14894 314 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 DRAP1Q14919 205 aaPredicted RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 SPATA1Q5VX52 437 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 HAUS3Q68CZ6 603 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 METTL2BQ6P1Q9 378 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 LCTLQ6UWM7 567 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 CRELD2Q6UXH1 353 aaPredicted RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 CTU1Q7Z7A3 348 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 TICAM1Q8IUC6 712 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 WDR63Q8IWG1 891 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 DHX40Q8IX18 779 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 RNF168Q8IYW5 571 aaPredicted RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 AADATQ8N5Z0 425 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 ANKRD52Q8NB46 1076 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 HUS1BQ8NHY5 278 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 MAGEC3Q8TD91 643 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 CREB3L4Q8TEY5 395 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 FAM216AQ8WUB2 273 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 METTL2AQ96IZ6 378 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 HARBI1Q96MB7 349 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 ZNF570Q96NI8 536 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 TMEM47Q9BQJ4 181 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 SYNCQ9H7C4 482 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 WDR26Q9H7D7 661 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 SCPEP1Q9HB40 452 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 BLOC1S4Q9NUP1 217 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 HCFC1R1Q9NWW0 138 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 OR6C3Q9NZP0 311 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 UBA2Q9UBT2 640 aaPredicted RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 WNT16Q9UBV4 365 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 AGO1Q9UL18 857 aaKnown RBP3.13□□□□□ -1.91
SKP1-203ENST00000517625 ERVK-11Q9UQG0 969 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 MTMR6Q9Y217 621 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 PSAT1Q9Y617 370 aa3.13□□□□□ -1.91
SKP1-203ENST00000517625 A0A1W2PQF6 199 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 GOLGA6L9A6NEM1 432 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 FAM90A8PA6NJQ4 464 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 SLC25A12O75746 678 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 RGS11O94810 467 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 SEC31AO94979 1220 aaKnown RBP3.12□□□□□ -1.91
SKP1-203ENST00000517625 VNN2O95498 520 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 GLUD1P00367 558 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 FAM90A13PP0C7W8 464 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 FAM90A24PP0C7X0 464 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 KRT10P13645 584 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 EDN2P20800 178 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 MAOAP21397 527 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 NFKBIAP25963 317 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 TM4SF1P30408 202 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 HOXA13P31271 388 aaPredicted RBP3.12□□□□□ -1.91
SKP1-203ENST00000517625 HOXC9P31274 260 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 RPL3P39023 403 aaKnown RBP3.12□□□□□ -1.91
SKP1-203ENST00000517625 THPOP40225 353 aa3.12□□□□□ -1.91
SKP1-203ENST00000517625 PSMB10P40306 273 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms