RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 MARCH4Q9P2E8 410 aaPredicted RBP12.9□□□□□ -0.34
PVT1-203ENST00000513868 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 FBXO10Q9UK96 956 aa12.9□□□□□ -0.34
PVT1-203ENST00000513868 CCDC162PA2VCL2 907 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 WDR91A4D1P6 747 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 HTRA2O43464 458 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 RPP40O75818 363 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 PGLSO95336 258 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 CYP17A1P05093 508 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 GKP32189 559 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 HADHAP40939 763 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SERPINB4P48594 390 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 TMPRSS15P98073 1019 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 HYAL1Q12794 435 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 DMC1Q14565 340 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SEPT7Q16181 437 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 TRIM68Q6AZZ1 485 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SYCE2Q6PIF2 218 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PTAR1Q7Z6K3 402 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 GALNT7Q86SF2 657 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PLD6Q8N2A8 252 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 TTC30BQ8N4P2 665 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 ZNF557Q8N988 423 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 ARMC2Q8NEN0 867 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 CALML6Q8TD86 181 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PDCD6IPQ8WUM4 868 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 OSCP1Q8WVF1 389 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 CDKN2AIPNLQ96HQ2 116 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 IQCGQ9H095 443 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 SLCO1B3Q9NPD5 702 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 DUS2Q9NX74 493 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 SLCO3A1Q9UIG8 710 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PCDHB9Q9Y5E1 797 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 TCF20Q9UGU0 1960 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 MUC22E2RYF6 1773 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 A0A096LPK6 155 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 A0A0U1RQS6 177 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 GLRA3O75311 464 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PIGNO95427 931 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 CRTAMO95727 393 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 S1PR4O95977 384 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 GOT2P00505 430 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 MPOP05164 745 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 C2P06681 752 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 ABL2P42684 1182 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PGGT1BP53609 377 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PRAMEP78395 509 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SEMA3AQ14563 771 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 ZKSCAN8Q15776 578 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 INSCQ1MX18 579 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 C16orf46Q6P387 395 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 C22orf39Q6P5X5 142 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 KYAT3Q6YP21 454 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 LDB1Q86U70 411 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 LMNTD2Q8IXW0 634 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 OR2AP1Q8NGE2 309 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 GPR150Q8NGU9 434 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 OR6P1Q8NGX9 317 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SMARCD2Q92925 531 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SEC16BQ96JE7 1060 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 ELAC2Q9BQ52 826 aaKnown RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 FBXO6Q9NRD1 293 aaPredicted RBP12.89□□□□□ -0.35
PVT1-203ENST00000513868 ZNF358Q9NW07 568 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 TMEM216Q9P0N5 145 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 SLC39A10Q9ULF5 831 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 PLXNB3Q9ULL4 1909 aa12.89□□□□□ -0.35
PVT1-203ENST00000513868 FAM95CA0A1B0GW59 222 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 SNX3O60493 162 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 PLIN3O60664 434 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 SOCS5O75159 536 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 IGSF6O95976 241 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 FCARP24071 287 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 GRIA4P48058 902 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 CD151P48509 253 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 POLD2P49005 469 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 ECT2LQ008S8 904 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 IRF9Q00978 393 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 GAB4Q2WGN9 574 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 RBM20Q5T481 1227 aaKnown RBP12.88□□□□□ -0.35
PVT1-203ENST00000513868 ARMC12Q5T9G4 340 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
PVT1-203ENST00000513868 GKAP1Q5VSY0 366 aaPredicted RBP12.88□□□□□ -0.35
PVT1-203ENST00000513868 FAM47EQ6ZV65 393 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 GLT6D1Q7Z4J2 308 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 SLC41A1Q8IVJ1 513 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 CEP97Q8IW35 865 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 OR4K2Q8NGD2 314 aa12.88□□□□□ -0.35
PVT1-203ENST00000513868 BPIFB1Q8TDL5 484 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms