RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 SPATA19Q7Z5L4 167 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 ZFP14Q9HCL3 533 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 HMX1Q9NP08 348 aaPredicted RBP12.52□□□□□ -0.4
COL11A1-210ENST00000512756 ARHGEF3Q9NR81 526 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 ZNF624Q9P2J8 865 aaPredicted RBP12.52□□□□□ -0.4
COL11A1-210ENST00000512756 PACSIN3Q9UKS6 424 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 VPS4AQ9UN37 437 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 ERGIC3Q9Y282 383 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.4
COL11A1-210ENST00000512756 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.4
COL11A1-210ENST00000512756 ADRA1BP35368 520 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 KLF10Q13118 480 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 ANXA8L1Q5VT79 327 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 TPGS1Q6ZTW0 290 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 CUZD1Q86UP6 607 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 RBFAQ8N0V3 343 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 SLC4A11Q8NBS3 891 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 FAM13CQ8NE31 585 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 OR52L1Q8NGH7 329 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 SLC38A2Q96QD8 506 aa12.52□□□□□ -0.4
COL11A1-210ENST00000512756 AGO1Q9UL18 857 aaKnown RBP12.52□□□□□ -0.4
COL11A1-210ENST00000512756 MSCO60682 206 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 PIAS1O75925 651 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 HDCP19113 662 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 SLC7A2P52569 658 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 INHBEP58166 350 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 ENPEPQ07075 957 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 BNIP1Q12981 228 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 DOK6Q6PKX4 331 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 ADGRD1Q6QNK2 874 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 MON1BQ7L1V2 547 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 CMC1Q7Z7K0 106 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 XYLT1Q86Y38 959 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 CSPG4P5Q96PW8 444 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 PCDHGC3Q9UN70 934 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 SHOX2O60902 331 aaPredicted RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 JAM2P57087 298 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 NDUFA5Q16718 116 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 AMIGO2Q86SJ2 522 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 FAM20CQ8IXL6 584 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 ZNF671Q8TAW3 534 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 PHF10Q8WUB8 498 aaKnown RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 BSNDQ8WZ55 320 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 POLE3Q9NRF9 147 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 LGALS13Q9UHV8 139 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 R3HDM2Q9Y2K5 976 aaKnown RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 TM7SF2O76062 418 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 OR6B1O95007 311 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 ARF4P18085 180 aaPredicted RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 HTR7P34969 479 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 ATP12AP54707 1039 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 USP4Q13107 963 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 IKBKEQ14164 716 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 C9orf57Q5W0N0 161 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 TRIM40Q6P9F5 258 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 RD3Q7Z3Z2 195 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 DGCR14Q96DF8 476 aaKnown RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 PRDM8Q9NQV8 689 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
COL11A1-210ENST00000512756 MRPL39Q9NYK5 338 aaKnown RBP12.52□□□□□ -0.41
COL11A1-210ENST00000512756 C4BPAP04003 597 aaKnown RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 UMPSP11172 480 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 COPZ1P61923 177 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 INTS6LQ5JSJ4 861 aaKnown RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 KRT74Q7RTS7 529 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 ARMC8Q8IUR7 673 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 ZC3H7AQ8IWR0 971 aaKnown RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 KBTBD2Q8IY47 623 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 GSTCDQ8NEC7 633 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 ZHX1-C8orf76Q96EF9 292 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 PLEKHG4BQ96PX9 1271 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 MUC13Q9H3R2 512 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 EPB41L1Q9H4G0 881 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 KCNE2Q9Y6J6 123 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 IRF6O14896 467 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 CILPO75339 1184 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 FARP2O94887 1054 aaPredicted RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 CDKN2BP42772 138 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 HADHBP55084 474 aaKnown RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 PFKPQ01813 784 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 DENND1CQ8IV53 801 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 LINGO1Q96FE5 620 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 ZNF558Q96NG5 402 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 PANX1Q96RD7 426 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 MRPL45Q9BRJ2 306 aaKnown RBP12.51□□□□□ -0.41
COL11A1-210ENST00000512756 S100A14Q9HCY8 104 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 DMTF1Q9Y222 760 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 ATP6AP2A0A1C7CYW4 349 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 OR6C75A6NL08 312 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 RFXANKO14593 260 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 ATP6AP2O75787 350 aa12.51□□□□□ -0.41
COL11A1-210ENST00000512756 LINC00032P0C843 101 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms