RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 CCDC92Q53HC0 331 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 PITRM1Q5JRX3 1037 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 UBAP2Q5T6F2 1119 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 ACBD5Q5T8D3 534 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 TAC4Q86UU9 113 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TRIM69Q86WT6 500 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 SYT12Q8IV01 421 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 OR6K2Q8NGY2 324 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 ACTRT2Q8TDY3 377 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 LINGO1Q96FE5 620 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 HERPUD2Q9BSE4 406 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TRMOQ9BU70 441 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 MIEF1Q9NQG6 463 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 SLC25A13Q9UJS0 675 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 PADI4Q9UM07 663 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 CLCA2Q9UQC9 943 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TEX264Q9Y6I9 313 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 HCRTO43612 131 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 COL6A2P12110 1019 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 RRM2P31350 389 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 RFX3P48380 749 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TTPAP49638 278 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 AIF1P55008 147 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 DAOAP59103 153 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 ACTR3P61158 418 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 ALDH6A1Q02252 535 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 CNTN1Q12860 1018 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 PLCL1Q15111 1095 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 VPS26BQ4G0F5 336 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TTC23Q5W5X9 447 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 ABRAXAS1Q6UWZ7 409 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 USP50Q70EL3 339 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 SPPL2CQ8IUH8 684 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 YAF2Q8IY57 180 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 PGAM4Q8N0Y7 254 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 STK40Q8N2I9 435 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TMEM132CQ8N3T6 1108 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 SFRP1Q8N474 314 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TBC1D19Q8N5T2 526 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 OR4K2Q8NGD2 314 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 MAGED4Q96JG8 741 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 SPATA16Q9BXB7 569 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 EPS8L2Q9H6S3 715 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 CAPN10Q9HC96 672 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 PNPLA3Q9NST1 481 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TRPC4Q9UBN4 977 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 GIT1Q9Y2X7 761 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 MYO9BQ13459 2157 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 RECQL5O94762 991 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 KCNH1O95259 989 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 FGF1P05230 155 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 OCM2P0CE71 109 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 OCMP0CE72 109 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 CYP2A7P20853 494 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 DGKAP23743 735 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TKTP29401 623 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 IRF9Q00978 393 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TNK2Q07912 1038 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TAF10Q12962 218 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TUSC3Q13454 348 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 OLIG2Q13516 323 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 NOMO2Q5JPE7 1267 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 HECTD3Q5T447 861 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 ZYG11AQ6WRX3 759 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TAS1R3Q7RTX0 852 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 TRMT11Q7Z4G4 463 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 ADHFE1Q8IWW8 467 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 OR8H2Q8N162 312 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 PARP8Q8N3A8 854 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 ARRDC4Q8NCT1 418 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 SNX27Q96L92 541 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 CDK5RAP1Q96SZ6 601 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 MRPS26Q9BYN8 205 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 C6orf62Q9GZU0 229 aaPredicted RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 TPRKBQ9Y3C4 175 aa8.08□□□□□ -1.12
NEK1-208ENST00000512193 PARP4Q9UKK3 1724 aaKnown RBP8.08□□□□□ -1.12
NEK1-208ENST00000512193 ZBTB14O43829 449 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 OR56A5P0C7T3 313 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 XIAPP98170 497 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 KLF1Q13351 362 aaPredicted RBP8.07□□□□□ -1.12
NEK1-208ENST00000512193 CCDC142Q17RM4 750 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 SLC9B1Q4ZJI4 515 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 RALGPS2Q86X27 583 aaPredicted RBP8.07□□□□□ -1.12
NEK1-208ENST00000512193 HEXDCQ8WVB3 486 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 SOCS4Q8WXH5 440 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 ESAMQ96AP7 390 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 C12orf42Q96LP6 360 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 TEKT5Q96M29 485 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 PANX3Q96QZ0 392 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 CLK4Q9HAZ1 481 aaKnown RBP8.07□□□□□ -1.12
NEK1-208ENST00000512193 STK39Q9UEW8 545 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 PPM1HQ9ULR3 514 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 ZMYND8Q9ULU4 1186 aaPredicted RBP8.07□□□□□ -1.12
NEK1-208ENST00000512193 TELO2Q9Y4R8 837 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 FADS3Q9Y5Q0 445 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 U3KQV3 271 aa8.07□□□□□ -1.12
NEK1-208ENST00000512193 MANSC4A6NHS7 340 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms