RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZNF397Q8NF99 534 aaPredicted RBP11.65□□□□□ -0.55
RNF4-216ENST00000511859 HCAR2Q8TDS4 363 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 NT5C3BQ969T7 300 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 PDXPQ96GD0 296 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 PHF12Q96QT6 1004 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 ZPBPQ9BS86 351 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.55
RNF4-216ENST00000511859 TMEM168Q9H0V1 697 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 COQ6Q9Y2Z9 468 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 DAAM1Q9Y4D1 1078 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 SNX10Q9Y5X0 201 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 KCNMB2Q9Y691 235 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 ANKRD36A6QL64 1941 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 TTLL8A6PVC2 850 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 SEMA7AO75326 666 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 STAT1P42224 750 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 KIAA1024LP59773 190 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 DEUP1Q05D60 604 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 BIRC2Q13490 618 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 COBLL1Q53SF7 1204 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 ARTNQ5T4W7 220 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 ANKS6Q68DC2 871 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 ZNF787Q6DD87 383 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 NYAP1Q6ZVC0 841 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 MAMDC2Q7Z304 686 aaPredicted RBP11.64□□□□□ -0.55
RNF4-216ENST00000511859 ZDHHC17Q8IUH5 632 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 FAM114A1Q8IWE2 563 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 NRSN1Q8IZ57 195 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 CPT1CQ8TCG5 803 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 OR1E3Q8WZA6 343 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 STARD8Q92502 1023 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 HMCESQ96FZ2 354 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 CCDC34Q96HJ3 373 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 GDAP1L1Q96MZ0 367 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 GTPBP4Q9BZE4 634 aaKnown RBP11.64□□□□□ -0.55
RNF4-216ENST00000511859 TTYH3Q9C0H2 523 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 OCIAD1Q9NX40 245 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNF4-216ENST00000511859 MFHAS1Q9Y4C4 1052 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 PCDHB3Q9Y5E6 796 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 ITPR3Q14573 2671 aa11.64□□□□□ -0.55
RNF4-216ENST00000511859 A1L4Q6 167 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 CFAP69A5D8W1 941 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 TMEM202A6NGA9 273 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 ZSCAN5CA6NGD5 496 aaPredicted RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 KRT38O76015 456 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 THRAP10827 490 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 POU3F2P20265 443 aaPredicted RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 TNFRSF8P28908 595 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 ACVRL1P37023 503 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 DCTP40126 519 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 NDUFA8P51970 172 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 PEX6Q13608 980 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 SLC25A52Q3SY17 297 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 OTUD1Q5VV17 481 aaPredicted RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 KCTD16Q68DU8 428 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 C16orf46Q6P387 395 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 TMEM71Q6P5X7 295 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 FOXR2Q6PJQ5 311 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 CEACAM20Q6UY09 585 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 ENOSF1Q7L5Y1 443 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 KDELC2Q7Z4H8 507 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 FAM129CQ86XR2 697 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 DRC7Q8IY82 874 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 C1orf131Q8NDD1 294 aaKnown RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 CCL4L1Q8NHW4 92 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 ZDHHC1Q8WTX9 485 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 FUBP1Q96AE4 644 aaKnown RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 RTP4Q96DX8 246 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 MAGEH1Q9H213 219 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 UBE2TQ9NPD8 197 aaPredicted RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 MRPL40Q9NQ50 206 aaKnown RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 SPATS2LQ9NUQ6 558 aaKnown RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 RMND1Q9NWS8 449 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
RNF4-216ENST00000511859 TMEM184BQ9Y519 407 aaPredicted RBP11.63□□□□□ -0.55
RNF4-216ENST00000511859 SETD2Q9BYW2 2564 aaPredicted RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 K7EM74 188 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 PDE2AO00408 941 aaPredicted RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 PCCBP05166 539 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 FGF1P05230 155 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 CCNB1P14635 433 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 NR1D1P20393 614 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 TRIM23P36406 574 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 NOP2P46087 812 aaKnown RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 SULT1E1P49888 294 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 LIG3P49916 1009 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 PMS1P54277 932 aaKnown RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 MAZP56270 477 aaKnown RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 RNASE9P60153 205 aaKnown RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 MC2RQ01718 297 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 UGP2Q16851 508 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 ATXN7L2Q5T6C5 722 aaPredicted RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 ZNF658Q5TYW1 1059 aaPredicted RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 ERAP2Q6P179 960 aa11.62□□□□□ -0.55
RNF4-216ENST00000511859 TIPARPQ7Z3E1 657 aaKnown RBP11.62□□□□□ -0.55
RNF4-216ENST00000511859 UNC5BQ8IZJ1 945 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms